C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: HECT domain containing 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000169036 Hectd2-009 ENSMUSG00000041180 10090 + 19:36554668-36620242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000169036
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000169036 1.188±0.13 0.131±0.06 0.858±0.00 2.987±1.34 0.555±0.16 0.276±0.06 0.127±0.04 0.250±0.09 0.215±0.13 0.952±0.23 0.521±0.26 0.335±0.17 5.110±2.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018O CIL_00018O_0002 CGP 19:36379067-36621135
CIL_0008L8 CIL_0008L8_0002 VISTA 19:36386377-36989836
CIL_00018N CIL_00018N_0002 CGP 19:36554639-36736653

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IBA ubiquitin-protein transferase activity
GO:0005634 IBA nucleus
GO:0005737 IBA cytoplasm
GO:0016874 IEA ligase activity
GO:0042787 IBA protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000298068 HECTD2-005 protein_coding Homo_sapiens 0 3781
ENST00000371667 HECTD2-003 protein_coding Homo_sapiens 0 2861
ENST00000446394 HECTD2-201 protein_coding Homo_sapiens 0 3731
ENST00000498446 HECTD2-002 processed_transcript Homo_sapiens 3e-39 169

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