C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008L8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1950 VISTA 9606 10:91288732-91891966
GeneTranscriptPositionBiotype
ENSG00000107854 (TNKS2)
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 		ENST00000371627 (TNKS2-001) 91798312-91865276 protein_coding
ENSG00000119938 (PPP1R3C)
protein phosphatase 1, regulatory subunit 3C 		ENST00000238994 (PPP1R3C-001) 91628442-91633054 protein_coding
ENSG00000165338 (HECTD2)
HECT domain containing E3 ubiquitin protein ligase 2 		ENST00000298068 (HECTD2-005) 91410345-91514761 protein_coding
ENST00000371667 (HECTD2-003) 91484108-91514829 protein_coding
ENST00000371681 (HECTD2-001) 91410344-91463664 protein_coding
ENST00000446394 (HECTD2-201) 91410285-91514826 protein_coding
ENST00000498446 (HECTD2-002) 91484090-91489981 processed_transcript
ENSG00000180581 (SRP9P1)
signal recognition particle 9 pseudogene 1 		ENST00000445874 (SRP9P1-001) 91807179-91807439 processed_pseudogene
ENSG00000213449 (GAPDHP28)
glyceraldehyde 3 phosphate dehydrogenase pseudogene 28 		ENST00000455134 (GAPDHP28-001) 91666780-91667782 processed_pseudogene
ENSG00000223876 (RPS27P1)
ribosomal protein S27 pseudogene 1 		ENST00000450552 (RPS27P1-001) 91544852-91545098 processed_pseudogene
ENSG00000228701 (TNKS2-AS1)
TNKS2 antisense RNA 1 (head to head) 		ENST00000432246 (TNKS2-AS1-002) 91782936-91798196 antisense
ENST00000432938 (TNKS2-AS1-001) 91782839-91798291 antisense
ENSG00000228759 (FAF2P1)
Fas associated factor family member 2 pseudogene 1 		ENST00000429974 (FAF2P1-001) 91765899-91767196 processed_pseudogene
ENSG00000271385 (RP11-108M11.3)
 ENST00000604630 (RP11-108M11.3-001) 91464578-91464708 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0008L8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1950 VISTA 10090 19:36386377-36989836
GeneTranscriptPositionBiotype
ENSMUSG00000024805 (Pcgf5)
polycomb group ring finger 5 		ENSMUST00000062389 (Pcgf5-201) 36409748-36456192 protein_coding
ENSMUST00000071267 (Pcgf5-202) 36379067-36456192 protein_coding
ENSMUSG00000024811 (Tnks2)
tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 		ENSMUST00000025729 (Tnks2-001) 36834232-36893477 protein_coding
ENSMUST00000164665 (Tnks2-008) 36871751-36884086 protein_coding
ENSMUST00000166677 (Tnks2-003) 36878507-36883081 retained_intron
ENSMUST00000167533 (Tnks2-005) 36857498-36862320 retained_intron
ENSMUST00000167724 (Tnks2-006) 36857881-36872463 protein_coding
ENSMUST00000168654 (Tnks2-009) 36880573-36887373 retained_intron
ENSMUST00000168656 (Tnks2-002) 36834404-36855937 processed_transcript
ENSMUST00000168718 (Tnks2-007) 36859094-36866303 protein_coding
ENSMUST00000168973 (Tnks2-004) 36849371-36855012 retained_intron
ENSMUSG00000040565 (Btaf1)
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated, (Mot1 homolog, S. cerevisiae) 		ENSMUST00000099494 (Btaf1-001) 36926079-37012752 protein_coding
ENSMUSG00000041180 (Hectd2)
HECT domain containing 2 		ENSMUST00000047247 (Hectd2-001) 36554669-36621135 protein_coding
ENSMUST00000139215 (Hectd2-002) 36554639-36621132 nonsense_mediated_decay
ENSMUST00000141503 (Hectd2-004) 36554678-36597381 retained_intron
ENSMUST00000142404 (Hectd2-007) 36605167-36612398 retained_intron
ENSMUST00000149629 (Hectd2-003) 36554669-36591147 retained_intron
ENSMUST00000155447 (Hectd2-006) 36554835-36569797 retained_intron
ENSMUST00000155594 (Hectd2-005) 36554866-36618844 nonsense_mediated_decay
ENSMUST00000169036 (Hectd2-009) 36554668-36620242 protein_coding
ENSMUST00000177381 (Hectd2-008) 36585489-36618844 nonsense_mediated_decay
ENSMUSG00000047632 (Fgfbp3)
fibroblast growth factor binding protein 3 		ENSMUST00000057337 (Fgfbp3-001) 36917550-36919615 protein_coding
ENSMUSG00000067279 (Ppp1r3c)
protein phosphatase 1, regulatory (inhibitor) subunit 3C 		ENSMUST00000087321 (Ppp1r3c-201) 36731737-36736653 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008L8_0001ENSG00000107854ENST00000371627ENSG00000119938ENST00000238994ENSG00000165338ENST00000298068ENST00000371667ENST00000371681ENST00000446394ENST00000498446ENSG00000180581ENST00000445874ENSG00000213449ENST00000455134ENSG00000223876ENST00000450552ENSG00000228701ENST00000432246ENST00000432938ENSG00000228759ENST00000429974ENSG00000271385ENST00000604630CIL_0008L8_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008L8_0001ENSG00000107854ENST00000371627ENSG00000119938ENST00000238994ENSG00000165338ENST00000298068ENST00000371667ENST00000371681ENST00000446394ENST00000498446ENSG00000180581ENST00000445874ENSG00000213449ENST00000455134ENSG00000223876ENST00000450552ENSG00000228701ENST00000432246ENST00000432938ENSG00000228759ENST00000429974ENSG00000271385ENST00000604630CIL_0008L8_0002ENSMUSG00000024805ENSMUST00000062389ENSMUST00000071267ENSMUSG00000024811ENSMUST00000025729ENSMUSG00000040565ENSMUST00000099494ENSMUSG00000041180ENSMUST00000047247ENSMUST00000139215ENSMUST00000141503ENSMUST00000142404ENSMUST00000149629ENSMUST00000155594ENSMUST00000169036ENSMUST00000177381ENSMUSG00000047632ENSMUST00000057337ENSMUSG00000067279ENSMUST00000087321
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107854 ENST00000371627 8.093±0.00 6.153±0.00 0.394±0.00 5.530±2.34 4.395±0.55 5.116±1.88 2.828±1.14 3.736±0.35 4.388±1.10 7.138±1.52 4.966±0.77 7.454±3.00 8.608±3.02 6.422±2.23
ENSG00000119938 ENST00000238994 1.028±0.00 1.598±0.00 2.598±0.00 8.259±2.43 6.576±3.54 3.467±2.44 14.053±5.56 11.534±3.48 13.811±1.00 4.590±1.02 36.352±0.25 4.922±4.89 3.854±1.58 5.819±4.90
ENSG00000165338 ENST00000298068 1.008±0.00 0.916±0.00 N/A 1.459±0.76 0.892±0.07 0.931±0.65 0.449±0.06 2.027±0.00 2.786±2.48 0.929±0.03 0.763±0.00 1.765±1.19 0.594±0.06 2.153±0.67
ENST00000371667 N/A N/A 0.138±0.00 0.700±0.00 N/A N/A N/A N/A N/A 0.717±0.00 N/A N/A N/A N/A
ENST00000371681 N/A N/A N/A 0.848±0.00 N/A N/A 0.200±0.00 N/A N/A 0.582±0.00 N/A 0.523±0.27 0.314±0.02 0.819±0.00
ENST00000446394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A
ENST00000498446 N/A N/A 0.197±0.00 N/A N/A 0.320±0.00 0.083±0.00 0.227±0.00 2.365±0.00 0.993±0.00 N/A 0.677±0.00 N/A N/A
ENSG00000180581 ENST00000445874 N/A N/A N/A N/A 0.338±0.00 N/A 0.460±0.00 N/A N/A N/A 1.513±1.13 10.769±0.00 N/A N/A
ENSG00000213449 ENST00000455134 N/A 0.031±0.00 N/A 0.016±0.00 N/A N/A N/A N/A N/A 0.014±0.00 0.076±0.00 N/A N/A 0.056±0.00
ENSG00000223876 ENST00000450552 N/A N/A N/A N/A N/A N/A N/A N/A 1.028±0.00 N/A N/A N/A N/A N/A
ENSG00000228701 ENST00000432246 N/A N/A N/A N/A 0.285±0.19 N/A 0.145±0.00 0.134±0.00 0.417±0.00 0.036±0.00 0.146±0.00 0.273±0.08 0.349±0.14 3.316±1.77
ENST00000432938 0.042±0.00 1.291±0.00 N/A 0.698±0.00 0.116±0.00 N/A 0.095±0.00 1.612±0.00 N/A N/A 0.554±0.00 0.244±0.00 0.306±0.23 3.243±0.00
ENSG00000228759 ENST00000429974 N/A N/A N/A 0.011±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.035±0.00
ENSG00000271385 ENST00000604630 N/A N/A N/A 33.350±0.00 N/A N/A N/A N/A 15.506±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024805 ENSMUST00000062389 3.653±0.49 2.047±1.09 6.585±0.52 2.038±1.26 4.061±0.79 3.224±1.05 13.865±1.54 3.833±1.20 3.451±2.76 3.949±1.75 4.507±0.50 2.610±0.88 32.828±10.65 14.164±6.41
ENSMUST00000071267 N/A 1.779±0.31 6.062±0.00 N/A N/A N/A N/A 0.880±0.00 2.080±0.79 1.396±0.00 N/A 1.833±0.69 23.412±7.61 N/A
ENSMUSG00000024811 ENSMUST00000025729 12.305±3.88 7.044±1.33 22.174±1.03 22.466±6.62 11.900±0.71 5.827±1.95 7.566±1.20 9.797±2.67 9.564±5.14 15.575±0.94 21.214±2.74 14.032±7.19 29.429±7.22 3.842±0.79
ENSMUST00000164665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167533 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000167724 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168656 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168973 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000040565 ENSMUST00000099494 3.152±1.89 2.347±0.79 2.370±1.77 3.785±2.04 3.188±1.15 3.024±1.00 0.942±0.41 2.361±0.67 4.377±3.24 4.355±0.42 0.707±0.22 3.378±1.09 5.520±2.29 10.217±2.65
ENSMUSG00000041180 ENSMUST00000047247 N/A 0.170±0.02 N/A N/A N/A 0.199±0.03 N/A N/A N/A N/A N/A N/A 0.082±0.00 N/A
ENSMUST00000139215 N/A N/A N/A N/A 0.308±0.00 N/A N/A 0.102±0.00 N/A N/A N/A 0.289±0.07 N/A N/A
ENSMUST00000141503 N/A 0.390±0.20 N/A N/A 0.524±0.00 0.606±0.20 N/A 0.262±0.04 N/A 0.397±0.00 N/A 0.692±0.12 N/A N/A
ENSMUST00000142404 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.038±0.00 N/A N/A
ENSMUST00000149629 0.260±0.02 0.049±0.00 N/A N/A 0.233±0.05 0.148±0.08 N/A 0.052±0.00 N/A 0.087±0.02 N/A 0.284±0.12 N/A N/A
ENSMUST00000155447 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155594 N/A N/A N/A N/A 0.601±0.00 N/A N/A 0.095±0.00 N/A N/A N/A N/A 0.230±0.10 1.533±0.00
ENSMUST00000169036 1.188±0.13 0.131±0.06 0.858±0.00 2.987±1.34 0.555±0.16 0.276±0.06 N/A 0.127±0.04 0.250±0.09 0.215±0.13 0.952±0.23 0.521±0.26 0.335±0.17 5.110±2.15
ENSMUST00000177381 N/A N/A N/A 2.704±0.00 N/A N/A N/A 0.198±0.00 N/A 0.255±0.00 N/A 0.491±0.13 0.279±0.12 2.580±0.00
ENSMUSG00000047632 ENSMUST00000057337 1.669±1.07 7.355±2.77 2.109±0.51 17.250±10.44 1.999±1.35 2.465±0.70 0.575±0.25 1.635±0.52 0.827±0.48 3.109±1.18 0.767±0.12 10.151±3.74 0.761±0.73 1.654±2.84
ENSMUSG00000067279 ENSMUST00000087321 11.533±1.00 6.911±1.56 5.507±0.46 4.224±2.68 24.533±6.11 4.432±0.42 30.494±4.88 2.755±0.39 20.291±15.16 7.955±0.68 125.501±62.18 3.236±1.28 1.891±0.71 1.054±0.21

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