C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: abl-interactor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000058835 Abi1 10090 - 2:22940073-23040241 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000078977 Abi1-009 22940369-23040230 protein_coding
  ENSMUST00000091394 Abi1-005 22940364-23040137 protein_coding
  ENSMUST00000093171 Abi1-010 22940892-23040140 protein_coding
  ENSMUST00000114544 Abi1-006 22940369-23040185 protein_coding
  ENSMUST00000123948 Abi1-004 22940308-23040122 protein_coding
  ENSMUST00000126112 Abi1-003 22940073-23040195 protein_coding
  ENSMUST00000135308 Abi1-015 22941808-22947210 retained_intron
  ENSMUST00000139038 Abi1-011 22940364-23040187 protein_coding
  ENSMUST00000140164 Abi1-001 22940073-23040241 protein_coding
  ENSMUST00000148294 Abi1-014 22941812-22950302 retained_intron
  ENSMUST00000149719 Abi1-002 22940086-23040241 protein_coding
  ENSMUST00000153931 Abi1-007 22940364-23040104 protein_coding
  ENSMUST00000154162 Abi1-012 22950226-22962611 retained_intron
  ENSMUST00000156344 Abi1-013 22946683-22960852 retained_intron
  ENSMUST00000178908 Abi1-201 22941233-23040219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078977ENSMUST00000091394ENSMUST00000093171ENSMUST00000114544ENSMUST00000126112ENSMUST00000139038ENSMUST00000140164ENSMUST00000149719ENSMUST00000153931ENSMUST00000154162ENSMUST00000156344ENSMUST00000178908
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078977 N/A N/A N/A 7.191±1.32 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000091394 7.132±1.07 5.072±0.72 13.284±0.08 9.516±1.17 5.549±1.35 N/A 4.497±0.42 N/A 4.364±0.86 11.689±2.48 2.716±0.50 7.325±1.26 N/A 1.659±0.01
ENSMUST00000093171 6.868±0.86 N/A N/A 8.347±1.06 4.805±0.98 7.040±0.26 N/A 5.185±0.92 4.151±0.00 8.082±0.00 N/A 6.384±0.53 4.389±0.00 2.834±0.37
ENSMUST00000114544 N/A N/A 7.397±0.00 N/A 7.123±2.64 11.533±1.66 N/A N/A 9.568±3.82 8.630±0.46 N/A 6.620±0.50 9.071±3.07 N/A
ENSMUST00000126112 N/A 3.767±0.00 9.971±0.22 5.885±0.46 N/A N/A N/A 4.451±0.53 4.711±1.17 6.177±0.00 1.304±0.15 10.663±2.84 7.166±0.36 N/A
ENSMUST00000139038 N/A N/A N/A 7.678±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.643±0.00
ENSMUST00000140164 7.698±1.13 5.020±0.91 N/A N/A 5.621±0.08 9.135±1.37 2.184±0.00 5.598±0.57 6.071±1.23 7.891±0.44 N/A 6.410±1.10 6.329±0.89 2.126±0.26
ENSMUST00000149719 N/A N/A N/A N/A N/A 9.779±2.32 N/A N/A 4.459±0.92 N/A N/A N/A N/A N/A
ENSMUST00000153931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.103±0.00 N/A N/A
ENSMUST00000154162 N/A 11.348±1.22 N/A N/A 13.772±0.00 N/A N/A N/A N/A N/A N/A 35.285±8.68 N/A N/A
ENSMUST00000156344 N/A 17.702±3.45 N/A 101.594±0.00 23.072±2.96 47.551±15.15 N/A 16.068±1.24 16.346±2.08 26.014±0.00 N/A 38.285±17.61 60.328±0.00 N/A
ENSMUST00000178908 10.536±1.90 6.412±1.18 N/A 13.088±0.00 5.288±1.04 11.460±0.00 3.559±0.41 3.840±0.25 4.721±0.37 13.755±4.90 1.741±0.11 6.721±0.32 14.684±2.62 3.100±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R4 CIL_0000R4_0002 CGP 2:22774094-22940266
CIL_0000R7 CIL_0000R7_0002 CGP 2:22895522-23040241
CIL_0000QC CIL_0000QC_0002 CGP 2:22940073-23114510

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0005515 IPI protein binding
GO:0005622 ISA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006928 IEA cellular component movement
GO:0009987 IDA cellular process
GO:0018108 ISA peptidyl-tyrosine phosphorylation
GO:0030027 IDA lamellipodium
GO:0030054 IEA cell junction
GO:0030175 IEA filopodium
GO:0030296 IDA protein tyrosine kinase activator activity
GO:0031209 IEA SCAR complex
GO:0031252 IDA cell leading edge
GO:0032403 IEA protein complex binding
GO:0035855 IMP megakaryocyte development
GO:0043005 IDA neuron projection
GO:0045211 IEA postsynaptic membrane
GO:0061098 IEA positive regulation of protein tyrosine kinase activity
GO:0070062 IEA extracellular vesicular exosome
GO:0072673 IMP lamellipodium morphogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010155 abi1a abl-interactor 1a protein_coding Danio_rerio
ENSDARG00000062991 abi1b abl-interactor 1b protein_coding Danio_rerio
ENSG00000136754 ABI1 abl-interactor 1 protein_coding Homo_sapiens

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