C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: abl-interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000126112 Abi1-003 ENSMUSG00000058835 10090 - 2:22940073-23040195 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainKidneyLiverLungMuscleOvaryPlacentaENSMUST00000126112
Transcript ID Adrenal Bladder Brain Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000126112 3.767±0.00 9.971±0.22 5.885±0.46 4.451±0.53 4.711±1.17 6.177±0.00 1.304±0.15 10.663±2.84 7.166±0.36

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R4 CIL_0000R4_0002 CGP 2:22774094-22940266
CIL_0000R7 CIL_0000R7_0002 CGP 2:22895522-23040241
CIL_0000QC CIL_0000QC_0002 CGP 2:22940073-23114510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0005515 IPI protein binding
GO:0005622 ISA intracellular
GO:0005634 IEA nucleus
GO:0005856 IEA cytoskeleton
GO:0009987 IDA cellular process
GO:0018108 ISA peptidyl-tyrosine phosphorylation
GO:0030027 IDA lamellipodium
GO:0030054 IEA cell junction
GO:0030296 IDA protein tyrosine kinase activator activity
GO:0031252 IDA cell leading edge
GO:0035855 IMP megakaryocyte development
GO:0043005 IDA neuron projection
GO:0045211 IEA postsynaptic membrane
GO:0061098 IEA positive regulation of protein tyrosine kinase activity
GO:0072673 IMP lamellipodium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346832 ABI1-201 protein_coding Homo_sapiens 0 1081
ENST00000359188 ABI1-007 protein_coding Homo_sapiens 0 2593
ENST00000376137 ABI1-202 protein_coding Homo_sapiens 0 1206
ENST00000376138 ABI1-001 protein_coding Homo_sapiens 0 1448
ENST00000376139 ABI1-009 protein_coding Homo_sapiens 0 2676
ENST00000376140 ABI1-006 protein_coding Homo_sapiens 0 1978
ENST00000376142 ABI1-005 protein_coding Homo_sapiens 0 1482
ENST00000376160 ABI1-004 protein_coding Homo_sapiens 0 2660
ENST00000376166 ABI1-003 protein_coding Homo_sapiens 0 1472
ENST00000376170 ABI1-002 protein_coding Homo_sapiens 0 1358
ENST00000376215 PDSS1-001 protein_coding Homo_sapiens 0 200
ENST00000470978 PDSS1-003 processed_transcript Homo_sapiens 2.00386e-43 180
ENST00000473481 ABI1-008 processed_transcript Homo_sapiens 0 483
ENST00000490841 ABI1-203 protein_coding Homo_sapiens 0 1079
ENST00000536334 ABI1-204 protein_coding Homo_sapiens 0 1175
ENST00000603375 RP11-132J14.3-001 unprocessed_pseudogene Homo_sapiens 0 508

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