C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: abl-interactor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000178908 Abi1-201 ENSMUSG00000058835 10090 - 2:22941233-23040219 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000178908
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000178908 10.536±1.90 6.412±1.18 13.088±0.00 5.288±1.04 11.460±0.00 3.559±0.41 3.840±0.25 4.721±0.37 13.755±4.90 1.741±0.11 6.721±0.32 14.684±2.62 3.100±0.51

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R4 CIL_0000R4_0002 CGP 2:22774094-22940266
CIL_0000R7 CIL_0000R7_0002 CGP 2:22895522-23040241
CIL_0000QC CIL_0000QC_0002 CGP 2:22940073-23114510

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001756 IMP somitogenesis
GO:0005515 IPI protein binding
GO:0005622 ISA intracellular
GO:0005737 IEA cytoplasm
GO:0009987 IDA cellular process
GO:0018108 ISA peptidyl-tyrosine phosphorylation
GO:0030027 IDA lamellipodium
GO:0030296 IDA protein tyrosine kinase activator activity
GO:0031252 IDA cell leading edge
GO:0035855 IMP megakaryocyte development
GO:0061098 IEA positive regulation of protein tyrosine kinase activity
GO:0072673 IMP lamellipodium morphogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346832 ABI1-201 protein_coding Homo_sapiens 0 1040
ENST00000359188 ABI1-007 protein_coding Homo_sapiens 0 2571
ENST00000376137 ABI1-202 protein_coding Homo_sapiens 0 1227
ENST00000376138 ABI1-001 protein_coding Homo_sapiens 0 1500
ENST00000376139 ABI1-009 protein_coding Homo_sapiens 0 2571
ENST00000376140 ABI1-006 protein_coding Homo_sapiens 0 1999
ENST00000376142 ABI1-005 protein_coding Homo_sapiens 0 1441
ENST00000376160 ABI1-004 protein_coding Homo_sapiens 0 2556
ENST00000376166 ABI1-003 protein_coding Homo_sapiens 0 1408
ENST00000376170 ABI1-002 protein_coding Homo_sapiens 0 1376
ENST00000473481 ABI1-008 processed_transcript Homo_sapiens 0 483
ENST00000490841 ABI1-203 protein_coding Homo_sapiens 0 1038
ENST00000536334 ABI1-204 protein_coding Homo_sapiens 0 1227
ENST00000603375 RP11-132J14.3-001 unprocessed_pseudogene Homo_sapiens 0 446

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