C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bromodomain and PHD finger containing, 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000063952 Brpf3 10090 + 17:28801090-28838546 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000004985 Brpf3-001 28801090-28838546 protein_coding
  ENSMUST00000123942 Brpf3-005 28814587-28817798 processed_transcript
  ENSMUST00000126868 Brpf3-006 28809659-28817174 processed_transcript
  ENSMUST00000127007 Brpf3-007 28828082-28836791 processed_transcript
  ENSMUST00000136233 Brpf3-008 28801784-28806308 processed_transcript
  ENSMUST00000140587 Brpf3-009 28823594-28836736 processed_transcript
  ENSMUST00000140973 Brpf3-004 28823674-28838541 processed_transcript
  ENSMUST00000144022 Brpf3-003 28822639-28836698 processed_transcript
  ENSMUST00000148149 Brpf3-010 28814434-28817560 retained_intron
  ENSMUST00000156029 Brpf3-002 28810551-28838493 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004985ENSMUST00000140587ENSMUST00000140973ENSMUST00000156029
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004985 8.106±3.03 10.742±2.90 5.395±0.64 5.438±1.05 4.444±0.65 12.172±1.23 1.492±0.52 5.166±0.42 7.471±5.19 4.867±1.75 1.539±0.30 9.182±2.10 15.954±5.95 10.619±2.84
ENSMUST00000140587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.376±0.00
ENSMUST00000140973 7.888±0.00 11.161±1.93 4.115±0.23 3.749±0.40 5.303±1.08 20.237±6.63 1.578±0.00 3.792±0.23 32.338±17.28 3.316±0.77 N/A 5.528±1.84 8.370±1.66 17.807±2.31
ENSMUST00000156029 N/A N/A N/A 1.344±0.00 N/A 4.078±0.69 N/A N/A N/A N/A N/A 2.854±0.17 4.262±1.13 0.969±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O6 CIL_0002O6_0002 CGP 17:28769307-28838546
CIL_0002O9 CIL_0002O9_0002 CGP 17:28801090-28890308

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008270 IEA zinc ion binding
GO:0043966 IEA histone H3 acetylation
GO:0070776 IEA MOZ/MORF histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070513 BRPF3 (1 of 2) bromodomain and PHD finger containing, 3 protein_coding Danio_rerio
ENSDARG00000074238 brpf3 bromodomain and PHD finger containing, 3 protein_coding Danio_rerio
ENSG00000096070 BRPF3 bromodomain and PHD finger containing, 3 protein_coding Homo_sapiens

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