C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000004985 Brpf3-001 ENSMUSG00000063952 10090 + 17:28801090-28838546 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000004985
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000004985 8.106±3.03 10.742±2.90 5.395±0.64 5.438±1.05 4.444±0.65 12.172±1.23 1.492±0.52 5.166±0.42 7.471±5.19 4.867±1.75 1.539±0.30 9.182±2.10 15.954±5.95 10.619±2.84

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O6 CIL_0002O6_0002 CGP 17:28769307-28838546
CIL_0002O9 CIL_0002O9_0002 CGP 17:28801090-28890308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008270 IEA zinc ion binding
GO:0043966 IEA histone H3 acetylation
GO:0070776 IEA MOZ/MORF histone acetyltransferase complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339717 BRPF3-003 protein_coding Homo_sapiens 0 2573
ENST00000357641 BRPF3-001 protein_coding Homo_sapiens 0 4527
ENST00000441123 BRPF3-004 nonsense_mediated_decay Homo_sapiens 0 3306
ENST00000441730 BRPF3-005 nonsense_mediated_decay Homo_sapiens 0 852
ENST00000449261 BRPF3-009 nonsense_mediated_decay Homo_sapiens 0 2573
ENST00000527657 BRPF3-012 protein_coding Homo_sapiens 0 250
ENST00000532330 BRPF3-010 nonsense_mediated_decay Homo_sapiens 0 3290
ENST00000534400 BRPF3-011 protein_coding Homo_sapiens 0 3640
ENST00000534694 BRPF3-008 protein_coding Homo_sapiens 0 2573

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