C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000140973 Brpf3-004 ENSMUSG00000063952 10090 + 17:28823674-28838541 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000140973
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000140973 7.888±0.00 11.161±1.93 4.115±0.23 3.749±0.40 5.303±1.08 20.237±6.63 1.578±0.00 3.792±0.23 32.338±17.28 3.316±0.77 5.528±1.84 8.370±1.66 17.807±2.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O6 CIL_0002O6_0002 CGP 17:28769307-28838546
CIL_0002O9 CIL_0002O9_0002 CGP 17:28801090-28890308

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339717 BRPF3-003 protein_coding Homo_sapiens 0 1131
ENST00000357641 BRPF3-001 protein_coding Homo_sapiens 0 1133
ENST00000441123 BRPF3-004 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000441730 BRPF3-005 nonsense_mediated_decay Homo_sapiens 0 852
ENST00000449261 BRPF3-009 nonsense_mediated_decay Homo_sapiens 0 1105
ENST00000532330 BRPF3-010 nonsense_mediated_decay Homo_sapiens 0 684
ENST00000534400 BRPF3-011 protein_coding Homo_sapiens 0 684
ENST00000534694 BRPF3-008 protein_coding Homo_sapiens 0 848

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