C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain and PHD finger containing, 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156029 Brpf3-002 ENSMUSG00000063952 10090 + 17:28810551-28838493 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryPlacentaTestisENSMUST00000156029
Transcript ID Brain Colon Ovary Placenta Testis
ENSMUST00000156029 1.344±0.00 4.078±0.69 2.854±0.17 4.262±1.13 0.969±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002O6 CIL_0002O6_0002 CGP 17:28769307-28838546
CIL_0002O9 CIL_0002O9_0002 CGP 17:28801090-28890308

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339717 BRPF3-003 protein_coding Homo_sapiens 0 920
ENST00000357641 BRPF3-001 protein_coding Homo_sapiens 0 2379
ENST00000441123 BRPF3-004 nonsense_mediated_decay Homo_sapiens 0 1770
ENST00000441730 BRPF3-005 nonsense_mediated_decay Homo_sapiens 0 459
ENST00000449261 BRPF3-009 nonsense_mediated_decay Homo_sapiens 0 920
ENST00000532330 BRPF3-010 nonsense_mediated_decay Homo_sapiens 0 1635
ENST00000534400 BRPF3-011 protein_coding Homo_sapiens 0 1988
ENST00000534694 BRPF3-008 protein_coding Homo_sapiens 0 920

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