C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00001S_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138650-ENSG00000254535 CGP 9606 4:133149315-134201748
GeneTranscriptPositionBiotype
ENSG00000138650 (PCDH10)
protocadherin 10 		ENST00000264360 (PCDH10-001) 133149315-133194700 protein_coding
ENST00000511112 (PCDH10-002) 133154893-133208606 retained_intron
ENST00000618019 (PCDH10-003) 133149315-133153888 protein_coding
ENSG00000251388 (RP11-427M20.1)
 ENST00000507844 (RP11-427M20.1-001) 133871246-134010690 lincRNA
ENSG00000254535 (PABPC4L)
poly(A) binding protein, cytoplasmic 4-like 		ENST00000421491 (PABPC4L-001) 134196333-134201748 protein_coding
CIL_00001S_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000049100-ENSMUSG00000090919 CGP 10090 3:45378398-46447941
GeneTranscriptPositionBiotype
ENSMUSG00000049100 (Pcdh10)
protocadherin 10 		ENSMUST00000166126 (Pcdh10-201) 45378398-45434566 protein_coding
ENSMUST00000170695 (Pcdh10-202) 45378398-45423711 protein_coding
ENSMUST00000171554 (Pcdh10-203) 45378398-45399594 protein_coding
ENSMUSG00000090919 (Pabpc4l)
poly(A) binding protein, cytoplasmic 4-like 		ENSMUST00000166505 (Pabpc4l-201) 46442197-46447941 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001S_0001ENSG00000138650ENST00000264360ENST00000511112ENST00000618019ENSG00000251388ENST00000507844ENSG00000254535ENST00000421491CIL_00001S_0002ENSMUSG00000049100ENSMUST00000166126ENSMUST00000170695ENSMUST00000171554ENSMUSG00000090919ENSMUST00000166505
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00001S_0001ENSG00000138650ENST00000264360ENST00000511112ENST00000618019ENSG00000251388ENST00000507844ENSG00000254535ENST00000421491CIL_00001S_0002ENSMUSG00000049100ENSMUST00000166126ENSMUST00000170695ENSMUST00000171554ENSMUSG00000090919ENSMUST00000166505
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138650 ENST00000264360 0.026±0.00 0.159±0.00 0.284±0.00 6.466±1.77 0.027±0.02 0.138±0.12 0.032±0.02 0.740±0.00 0.268±0.27 0.081±0.01 0.030±0.00 0.227±0.07 1.768±0.39 0.764±0.26
ENST00000511112 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.234±0.00
ENST00000618019 0.067±0.00 0.305±0.00 N/A 7.507±0.00 0.016±0.00 0.221±0.00 0.068±0.00 N/A 0.136±0.00 0.446±0.00 0.043±0.00 0.237±0.16 4.395±1.21 0.669±0.35
ENSG00000251388 ENST00000507844 0.118±0.00 N/A 0.350±0.00 0.020±0.00 N/A 0.254±0.00 0.271±0.00 N/A N/A 0.085±0.00 N/A 0.167±0.14 N/A 0.018±0.00
ENSG00000254535 ENST00000421491 0.366±0.00 0.243±0.00 0.296±0.00 0.040±0.01 0.374±0.01 0.196±0.03 0.236±0.06 0.473±0.00 0.234±0.21 0.397±0.30 0.061±0.00 0.247±0.22 0.728±0.56 0.589±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000049100 ENSMUST00000166126 N/A 0.278±0.05 0.011±0.00 N/A N/A N/A N/A N/A 0.004±0.00 N/A 0.011±0.00 0.022±0.00 0.033±0.00 0.050±0.03
ENSMUST00000170695 0.039±0.00 N/A 0.015±0.00 7.039±2.55 0.013±0.00 N/A N/A 0.035±0.00 0.018±0.01 N/A 0.006±0.00 0.068±0.07 0.111±0.03 0.058±0.02
ENSMUST00000171554 0.141±0.00 1.573±0.29 0.052±0.02 14.445±5.75 0.044±0.02 0.205±0.07 0.013±0.01 0.039±0.03 0.013±0.01 0.020±0.01 0.013±0.00 0.229±0.06 0.081±0.07 0.277±0.15
ENSMUSG00000090919 ENSMUST00000166505 0.284±0.30 0.124±0.07 0.187±0.08 0.217±0.14 0.102±0.05 0.069±0.03 0.061±0.01 0.039±0.02 0.107±0.08 0.184±0.08 0.023±0.01 0.507±0.30 0.170±0.13 0.036±0.01

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