C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00008W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045359-ENSDARG00000078773 CGP 7955 2:29960685-29967179
GeneTranscriptPositionBiotype
ENSDARG00000078773 (tmem70)
transmembrane protein 70 		ENSDART00000109160 (tmem70-002) 29964809-29967179 protein_coding
ENSDART00000135171 (tmem70-003) 29964871-29966977 protein_coding
CIL_00008W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000154582-ENSG00000175606 CGP 9606 8:73939169-73982783
GeneTranscriptPositionBiotype
ENSG00000154582 (TCEB1)
transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) 		ENST00000284811 (TCEB1-007) 73946401-73972106 protein_coding
ENST00000518127 (TCEB1-004) 73945119-73972287 protein_coding
ENST00000519082 (TCEB1-009) 73946700-73972252 protein_coding
ENST00000519487 (TCEB1-006) 73946264-73970637 protein_coding
ENST00000520210 (TCEB1-003) 73945608-73972170 protein_coding
ENST00000520242 (TCEB1-001) 73945617-73972247 protein_coding
ENST00000522337 (TCEB1-010) 73946473-73972232 protein_coding
ENST00000523815 (TCEB1-008) 73946534-73971908 protein_coding
ENST00000602840 (TCEB1-005) 73939169-73972186 protein_coding
ENST00000622804 (TCEB1-201) 73945138-73971908 protein_coding
ENSG00000175606 (TMEM70)
transmembrane protein 70 		ENST00000312184 (TMEM70-001) 73976209-73982783 protein_coding
ENST00000416961 (TMEM70-002) 73976195-73981586 nonsense_mediated_decay
ENST00000517439 (TMEM70-004) 73976207-73981366 protein_coding
ENST00000517614 (TMEM70-003) 73976219-73979021 retained_intron
ENST00000519551 (TMEM70-005) 73978748-73981481 retained_intron
ENST00000520167 (TMEM70-007) 73972437-73979134 processed_transcript
ENST00000523794 (TMEM70-006) 73972552-73976491 processed_transcript
ENSG00000244295 (RPS20P21)
ribosomal protein S20 pseudogene 21 		ENST00000466859 (RPS20P21-001) 73982125-73982467 processed_pseudogene
CIL_00008W_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000079658-ENSMUSG00000025940 CGP 10090 1:16641725-16678275
GeneTranscriptPositionBiotype
ENSMUSG00000025940 (Tmem70)
transmembrane protein 70 		ENSMUST00000065373 (Tmem70-002) 16665210-16678275 protein_coding
ENSMUST00000176451 (Tmem70-004) 16665236-16665811 processed_transcript
ENSMUST00000177501 (Tmem70-001) 16665207-16678195 protein_coding
ENSMUST00000177532 (Tmem70-003) 16665210-16677215 processed_transcript
ENSMUSG00000079658 (Tceb1)
transcription elongation factor B (SIII), polypeptide 1 		ENSMUST00000115352 (Tceb1-001) 16642767-16657042 protein_coding
ENSMUST00000185393 (Tceb1-009) 16643342-16648039 protein_coding
ENSMUST00000185771 (Tceb1-006) 16643191-16656914 protein_coding
ENSMUST00000186541 (Tceb1-010) 16646955-16656915 retained_intron
ENSMUST00000186701 (Tceb1-007) 16643472-16656625 protein_coding
ENSMUST00000186948 (Tceb1-004) 16643142-16657018 protein_coding
ENSMUST00000187910 (Tceb1-005) 16643169-16657038 protein_coding
ENSMUST00000188641 (Tceb1-002) 16641725-16656884 protein_coding
ENSMUST00000188987 (Tceb1-008) 16646836-16656900 retained_intron
ENSMUST00000190986 (Tceb1-011) 16647681-16656878 retained_intron
ENSMUST00000191535 (Tceb1-003) 16647736-16657042 retained_intron
ENSMUSG00000097744 (D030040B21Rik)
RIKEN cDNA D030040B21 gene 		ENSMUST00000181371 (D030040B21Rik-001) 16657552-16662278 lincRNA
ENSMUSG00000100959 (RP23-382H8.5)
predicted gene 7654 		ENSMUST00000186738 (RP23-382H8.5-001) 16662980-16663662 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008W_0001ENSDARG00000078773ENSDART00000109160ENSDART00000135171CIL_00008W_0002ENSG00000154582ENST00000284811ENST00000518127ENST00000519082ENST00000519487ENST00000520210ENST00000520242ENST00000522337ENST00000523815ENST00000602840ENST00000622804ENSG00000175606ENST00000312184ENST00000416961ENST00000517439ENST00000517614ENST00000519551ENST00000520167ENST00000523794ENSG00000244295ENST00000466859CIL_00008W_0003ENSMUSG00000025940ENSMUST00000065373ENSMUST00000176451ENSMUST00000177501ENSMUST00000177532ENSMUSG00000079658ENSMUST00000115352ENSMUST00000185393ENSMUST00000185771ENSMUST00000186541ENSMUST00000186701ENSMUST00000186948ENSMUST00000187910ENSMUST00000188641ENSMUST00000188987ENSMUST00000190986ENSMUST00000191535ENSMUSG00000097744ENSMUST00000181371ENSMUSG00000100959ENSMUST00000186738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00008W_0001ENSDARG00000078773ENSDART00000109160ENSDART00000135171CIL_00008W_0002ENSG00000154582ENST00000284811ENST00000518127ENST00000519082ENST00000519487ENST00000520242ENST00000522337ENST00000523815ENSG00000175606ENST00000312184ENST00000416961ENST00000517439ENST00000517614ENST00000519551ENST00000520167ENSG00000244295ENST00000466859CIL_00008W_0003ENSMUSG00000025940ENSMUST00000065373ENSMUST00000176451ENSMUST00000177501ENSMUST00000177532ENSMUSG00000079658ENSMUST00000115352ENSMUST00000185393ENSMUST00000185771ENSMUST00000186701ENSMUST00000186948ENSMUST00000187910ENSMUST00000188641ENSMUST00000188987ENSMUSG00000097744ENSMUST00000181371ENSMUSG00000100959ENSMUST00000186738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000078773 ENSDART00000109160 N/A N/A N/A 6.817±3.49 N/A N/A 15.120±5.37 36.242±10.30 2.792±0.00 N/A 3.080±0.00 N/A N/A N/A
ENSDART00000135171 N/A N/A N/A N/A N/A N/A 5.209±0.00 N/A 0.523±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154582 ENST00000284811 5.655±0.00 9.927±0.00 N/A 22.668±0.00 9.716±0.00 7.174±0.00 23.922±0.00 19.060±0.00 7.769±0.00 24.434±0.00 5.548±0.00 15.679±6.61 18.060±7.28 21.152±0.00
ENST00000518127 N/A 2.166±0.00 N/A N/A N/A 0.496±0.00 N/A N/A 0.332±0.00 N/A N/A 0.997±0.00 N/A N/A
ENST00000519082 7.375±0.00 N/A N/A N/A 6.891±5.56 9.211±0.00 5.739±4.20 1.711±0.00 2.499±0.00 16.429±0.00 3.594±2.02 22.028±17.15 17.895±0.00 39.140±19.74
ENST00000519487 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.902±0.00 5.718±0.00 N/A N/A
ENST00000520210 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520242 2.470±0.00 4.396±0.00 1.093±0.00 7.517±0.57 2.283±0.55 2.447±0.48 2.608±0.57 3.249±2.72 1.946±0.27 3.608±0.03 1.786±0.12 7.169±6.69 9.810±6.72 18.633±13.38
ENST00000522337 N/A N/A N/A N/A N/A N/A N/A 0.620±0.00 N/A N/A N/A N/A N/A 18.758±0.00
ENST00000523815 10.763±0.00 15.744±0.00 0.863±0.00 15.242±0.00 12.994±0.00 6.069±5.26 N/A 1.296±0.00 9.323±0.00 N/A 6.367±0.00 42.872±16.62 20.778±8.01 27.356±8.51
ENST00000602840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175606 ENST00000312184 1.020±0.00 13.753±0.00 0.360±0.00 4.943±2.21 1.882±1.52 1.707±0.39 1.502±0.66 2.832±0.59 2.183±0.33 1.070±0.84 6.670±6.03 4.324±2.74 2.215±0.58 2.686±0.00
ENST00000416961 2.933±0.00 17.354±0.00 0.563±0.00 9.491±0.00 6.996±3.30 3.281±1.28 3.958±2.68 5.822±1.23 5.297±2.38 N/A 57.494±0.00 7.248±3.18 5.589±0.00 4.828±2.55
ENST00000517439 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.289±0.00 N/A
ENST00000517614 N/A N/A N/A N/A N/A N/A 1.370±0.00 N/A N/A N/A N/A 15.518±0.00 7.724±0.00 11.585±0.00
ENST00000519551 N/A N/A N/A 9.483±0.00 N/A N/A N/A N/A N/A 2.008±0.00 N/A N/A N/A N/A
ENST00000520167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.479±0.00
ENST00000523794 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000244295 ENST00000466859 N/A N/A 0.892±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025940 ENSMUST00000065373 16.914±0.66 55.429±13.41 21.822±5.76 8.237±5.23 18.546±6.63 16.655±3.10 23.659±3.42 24.996±4.81 18.595±2.74 9.919±1.33 19.883±1.95 18.915±11.22 12.852±5.58 5.990±1.00
ENSMUST00000176451 35.332±12.90 98.098±47.38 N/A 21.964±7.35 37.203±11.92 25.023±5.23 N/A 31.004±13.18 22.462±2.67 13.245±4.67 N/A 67.812±16.60 N/A 8.754±2.01
ENSMUST00000177501 7.261±1.10 14.115±0.00 3.894±0.00 3.822±2.35 8.891±6.26 4.748±0.75 9.960±1.88 7.194±1.58 4.368±1.04 2.615±0.38 4.589±0.84 7.674±2.46 6.132±4.66 2.428±0.58
ENSMUST00000177532 N/A N/A N/A N/A N/A 13.421±0.00 N/A 21.016±0.00 N/A N/A N/A 24.760±5.21 N/A N/A
ENSMUSG00000079658 ENSMUST00000115352 N/A N/A 12.273±0.92 9.015±0.00 N/A 2.511±0.00 N/A 5.210±0.00 11.762±8.74 N/A 7.805±0.95 7.507±0.86 15.512±6.25 N/A
ENSMUST00000185393 N/A 2.749±0.00 45.031±0.00 105.819±0.00 N/A 5.597±0.00 N/A N/A N/A N/A 40.893±8.52 73.096±27.54 92.086±32.93 357.633±0.00
ENSMUST00000185771 N/A N/A N/A N/A N/A 1.245±0.00 N/A 6.110±0.00 N/A 2.696±0.00 12.901±0.00 3.283±1.39 N/A 31.459±4.12
ENSMUST00000186541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186701 N/A 1.419±0.00 N/A N/A N/A 1.602±0.45 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186948 4.522±0.47 N/A 16.178±0.00 N/A 3.650±0.80 2.883±0.00 9.706±2.49 6.524±2.73 14.948±6.85 4.640±0.62 23.562±2.78 N/A 14.597±5.21 N/A
ENSMUST00000187910 3.135±0.00 N/A N/A N/A 2.867±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000188641 2.548±0.86 2.898±0.83 16.562±2.75 17.863±7.95 2.436±1.17 2.547±0.83 3.495±1.27 4.649±1.30 5.335±2.57 4.430±0.40 19.629±3.68 3.809±2.45 4.091±2.40 10.234±1.76
ENSMUST00000188987 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.309±0.00 N/A N/A
ENSMUST00000190986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000191535 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000097744 ENSMUST00000181371 0.028±0.01 N/A 0.002±0.00 0.012±0.01 0.027±0.01 0.068±0.02 0.019±0.01 0.019±0.01 0.012±0.01 0.021±0.00 0.012±0.00 0.058±0.06 0.014±0.00 0.800±0.34
ENSMUSG00000100959 ENSMUST00000186738 N/A N/A 0.015±0.00 N/A N/A N/A N/A 0.285±0.00 0.019±0.01 N/A 0.030±0.00 0.110±0.00 0.019±0.00 0.326±0.22

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