C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000519082 TCEB1-009 ENSG00000154582 9606 - 8:73946700-73972252 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000519082
Transcript ID Adipose Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000519082 7.375±0.00 6.891±5.56 9.211±0.00 5.739±4.20 1.711±0.00 2.499±0.00 16.429±0.00 3.594±2.02 22.028±17.15 17.895±0.00 39.140±19.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C4 CIL_0005C4_0002 CGP 8:73780097-73972287
CIL_00008W CIL_00008W_0002 CGP 8:73939169-73982783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000186948 Tceb1-004 protein_coding Mus_musculus 0 403
ENSMUST00000185393 Tceb1-009 protein_coding Mus_musculus 0 401
ENSMUST00000185771 Tceb1-006 protein_coding Mus_musculus 0 401
ENSMUST00000115352 Tceb1-001 protein_coding Mus_musculus 0 401
ENSMUST00000188641 Tceb1-002 protein_coding Mus_musculus 0 399
ENSMUST00000187910 Tceb1-005 protein_coding Mus_musculus 0 364
ENSMUST00000119040 Gm14517-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000186701 Tceb1-007 protein_coding Mus_musculus 0 252
ENSMUST00000117761 Gm11386-001 processed_pseudogene Mus_musculus 0 230

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