C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000B3_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090617-ENSDARG00000016858 CGP 7955 21:3478758-3689369
GeneTranscriptPositionBiotype
ENSDARG00000016858 (smad7)
MAD, mothers against decapentaplegic homolog 7 (Drosophila) 		ENSDART00000009740 (smad7-201) 3658169-3689369 protein_coding
ENSDART00000150975 (smad7-001) 3658167-3659030 protein_coding
ENSDARG00000090617 (CTIF)
CBP80/20-dependent translation initiation factor 		ENSDART00000127740 (CTIF-201) 3478758-3576586 protein_coding
CIL_0000B3_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000134030-ENSG00000101665 CGP 9606 18:48539046-48950711
GeneTranscriptPositionBiotype
ENSG00000101665 (SMAD7)
SMAD family member 7 		ENST00000262158 (SMAD7-001) 48919853-48950711 protein_coding
ENST00000545051 (SMAD7-003) 48920027-48942807 retained_intron
ENST00000585986 (SMAD7-006) 48921501-48942732 processed_transcript
ENST00000586093 (SMAD7-007) 48921534-48948505 protein_coding
ENST00000587336 (SMAD7-004) 48921411-48930182 processed_transcript
ENST00000588190 (SMAD7-008) 48921641-48933722 processed_transcript
ENST00000589634 (SMAD7-005) 48921372-48950424 protein_coding
ENST00000591805 (SMAD7-002) 48920993-48949333 protein_coding
ENSG00000134030 (CTIF)
CBP80/20-dependent translation initiation factor 		ENST00000256413 (CTIF-001) 48539046-48863217 protein_coding
ENST00000382998 (CTIF-003) 48539158-48861906 protein_coding
ENST00000587752 (CTIF-005) 48539988-48711695 protein_coding
ENST00000587769 (CTIF-010) 48692512-48758229 processed_transcript
ENST00000587860 (CTIF-002) 48760182-48860565 retained_intron
ENST00000588345 (CTIF-006) 48540095-48663812 protein_coding
ENST00000589585 (CTIF-008) 48621444-48711657 processed_transcript
ENST00000590422 (CTIF-011) 48862544-48863208 processed_transcript
ENST00000591387 (CTIF-004) 48539415-48664534 protein_coding
ENST00000591412 (CTIF-007) 48539210-48663811 protein_coding
ENST00000592658 (CTIF-012) 48859882-48862355 processed_transcript
ENSG00000267762 (RP11-426J5.2)
 ENST00000589818 (RP11-426J5.2-001) 48673575-48688419 antisense
ENSG00000267764 (RP11-484L8.1)
 ENST00000590649 (RP11-484L8.1-001) 48826051-48834770 antisense
ENSG00000278983 (RP11-426J5.3)
 ENST00000624725 (RP11-426J5.3-001) 48564795-48568342 TEC
ENSG00000279250 (RP11-46D1.2)
 ENST00000624979 (RP11-46D1.2-001) 48755693-48756318 TEC
ENSG00000279629 (RP11-426J5.1)
 ENST00000623145 (RP11-426J5.1-001) 48661840-48662635 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B3_0001ENSDARG00000016858ENSDART00000009740ENSDART00000150975ENSDARG00000090617ENSDART00000127740CIL_0000B3_0002ENSG00000101665ENST00000262158ENST00000545051ENST00000585986ENST00000586093ENST00000587336ENST00000588190ENST00000589634ENST00000591805ENSG00000134030ENST00000256413ENST00000382998ENST00000587752ENST00000587769ENST00000587860ENST00000588345ENST00000589585ENST00000590422ENST00000591387ENST00000591412ENST00000592658ENSG00000267762ENST00000589818ENSG00000267764ENST00000590649ENSG00000278983ENST00000624725ENSG00000279250ENST00000624979ENSG00000279629ENST00000623145
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000B3_0001ENSDARG00000016858ENSDART00000009740ENSDART00000150975ENSDARG00000090617ENSDART00000127740CIL_0000B3_0002ENSG00000101665ENST00000262158ENST00000545051ENST00000585986ENST00000586093ENST00000588190ENST00000589634ENST00000591805ENSG00000134030ENST00000256413ENST00000382998ENST00000587752ENST00000587769ENST00000587860ENST00000589585ENSG00000267762ENST00000589818ENSG00000267764ENST00000590649ENSG00000278983ENST00000624725ENSG00000279250ENST00000624979ENSG00000279629ENST00000623145
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000016858 ENSDART00000009740 N/A N/A N/A 4.042±3.05 N/A N/A 4.458±1.02 3.168±2.43 0.640±0.00 N/A 7.128±0.00 N/A N/A N/A
ENSDART00000150975 N/A N/A N/A 4.127±1.48 N/A N/A 4.292±0.95 12.508±0.00 0.434±0.00 N/A N/A N/A N/A N/A
ENSDARG00000090617 ENSDART00000127740 N/A N/A N/A N/A N/A N/A N/A N/A 0.624±0.00 N/A 0.918±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000101665 ENST00000262158 N/A 2.193±0.00 0.616±0.00 0.554±0.01 N/A 2.570±0.00 0.207±0.00 1.519±0.65 0.637±0.00 2.564±0.38 2.088±0.00 3.260±0.91 3.353±1.11 N/A
ENST00000545051 5.046±0.00 4.356±0.00 N/A 0.580±0.00 2.344±0.00 N/A N/A 2.169±0.00 0.541±0.00 N/A N/A 4.164±2.52 6.034±4.29 1.379±0.36
ENST00000585986 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.997±0.00 N/A N/A
ENST00000586093 N/A N/A N/A N/A N/A N/A N/A N/A 2.246±0.00 N/A N/A N/A N/A N/A
ENST00000587336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588190 N/A N/A N/A N/A 2.878±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589634 N/A N/A 1.001±0.00 0.871±0.00 2.229±0.00 1.209±0.00 N/A N/A 2.572±0.00 N/A N/A N/A N/A N/A
ENST00000591805 6.823±0.00 N/A 1.843±0.00 1.348±0.57 4.870±0.00 2.614±1.52 0.530±0.00 N/A 1.298±0.45 1.773±0.00 N/A N/A N/A 0.417±0.00
ENSG00000134030 ENST00000256413 N/A N/A 0.271±0.00 19.123±0.00 7.746±0.00 7.348±0.00 1.278±0.92 N/A 2.523±1.23 1.473±1.25 4.215±0.00 11.736±6.98 5.606±1.03 2.956±0.00
ENST00000382998 7.302±0.00 2.361±0.00 N/A 6.057±4.99 14.312±0.00 2.884±0.00 3.438±0.00 4.737±0.00 1.373±0.00 N/A 4.085±0.00 7.467±5.48 3.162±1.86 3.949±0.07
ENST00000587752 N/A N/A 2.529±0.00 N/A 3.597±0.00 N/A N/A N/A 6.551±0.00 N/A N/A 4.184±0.00 N/A N/A
ENST00000587769 N/A N/A 2.424±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587860 N/A N/A 0.679±0.00 N/A 0.806±0.00 N/A 0.279±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000588345 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589585 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.315±0.00 N/A N/A N/A
ENST00000590422 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591387 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591412 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000267762 ENST00000589818 N/A 0.053±0.00 N/A 0.063±0.00 N/A N/A 0.205±0.00 N/A 0.093±0.00 N/A N/A 0.136±0.00 N/A 0.740±0.64
ENSG00000267764 ENST00000590649 0.132±0.00 N/A 0.102±0.00 0.037±0.00 0.182±0.08 0.602±0.00 0.062±0.01 0.211±0.05 0.198±0.00 N/A N/A 0.050±0.01 0.028±0.00 0.016±0.00
ENSG00000278983 ENST00000624725 0.697±0.00 0.267±0.00 0.369±0.00 0.204±0.15 0.462±0.00 0.360±0.02 0.070±0.03 0.072±0.03 0.124±0.12 0.157±0.04 0.050±0.00 0.194±0.08 0.105±0.00 0.169±0.09
ENSG00000279250 ENST00000624979 N/A 0.023±0.00 0.065±0.00 0.230±0.16 0.120±0.02 0.696±0.00 0.250±0.00 N/A 0.419±0.00 0.886±0.00 1.048±0.00 0.133±0.10 N/A 0.255±0.00
ENSG00000279629 ENST00000623145 N/A N/A N/A N/A 0.170±0.00 N/A 0.455±0.00 N/A 0.300±0.25 N/A N/A 0.109±0.00 N/A N/A

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