C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000ED_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000138100-ENSG00000163794 CGP 9606 2:27282392-27308445
GeneTranscriptPositionBiotype
ENSG00000138100 (TRIM54)
tripartite motif containing 54
ENST00000296098 (TRIM54-001) 27282462-27307439 protein_coding
ENST00000380075 (TRIM54-002) 27282392-27307435 protein_coding
ENST00000485306 (TRIM54-004) 27305185-27306261 retained_intron
ENST00000488321 (TRIM54-003) 27304691-27305779 retained_intron
ENSG00000163794 (UCN)
urocortin
ENST00000296099 (UCN-001) 27307400-27308445 protein_coding
CIL_0000ED_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000062077-ENSMUSG00000038676 CGP 10090 5:31116712-31138829
GeneTranscriptPositionBiotype
ENSMUSG00000038676 (Ucn)
urocortin
ENSMUST00000043475 (Ucn-001) 31138063-31138829 protein_coding
ENSMUSG00000062077 (Trim54)
tripartite motif-containing 54
ENSMUST00000013771 (Trim54-001) 31116712-31137628 protein_coding
ENSMUST00000114637 (Trim54-002) 31116734-31137630 protein_coding
ENSMUSG00000085493 (Gm15469)
predicted gene 15469
ENSMUST00000136014 (Gm15469-001) 31135753-31137344 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ED_0001ENSG00000138100ENST00000296098ENST00000380075ENST00000485306ENST00000488321ENSG00000163794ENST00000296099CIL_0000ED_0002ENSMUSG00000038676ENSMUST00000043475ENSMUSG00000062077ENSMUST00000013771ENSMUST00000114637ENSMUSG00000085493ENSMUST00000136014
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000ED_0001ENSG00000138100ENST00000296098ENST00000380075ENST00000485306ENST00000488321ENSG00000163794ENST00000296099CIL_0000ED_0002ENSMUSG00000038676ENSMUST00000043475ENSMUSG00000062077ENSMUST00000013771ENSMUST00000114637ENSMUSG00000085493ENSMUST00000136014
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138100 ENST00000296098 0.070±0.00 0.243±0.00 N/A 0.486±0.00 1.464±0.00 0.128±0.00 N/A 0.293±0.00 N/A N/A N/A 0.041±0.00 0.031±0.00 2.284±0.00
ENST00000380075 N/A N/A N/A 0.207±0.00 3.084±2.55 N/A 42.864±30.03 1.027±0.00 N/A 0.275±0.00 85.273±49.30 0.148±0.00 0.249±0.20 7.322±0.15
ENST00000485306 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A N/A
ENST00000488321 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.207±0.00 N/A N/A 0.099±0.00 N/A
ENSG00000163794 ENST00000296099 0.100±0.00 0.424±0.00 0.131±0.00 1.381±0.89 N/A 1.062±0.00 N/A 0.850±0.00 1.137±0.00 1.128±0.00 N/A 0.923±0.18 0.866±0.32 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038676 ENSMUST00000043475 N/A N/A N/A 0.520±0.46 N/A N/A 0.876±0.29 0.066±0.00 0.025±0.00 N/A 1.808±0.72 0.144±0.00 0.118±0.12 0.615±0.13
ENSMUSG00000062077 ENSMUST00000013771 N/A N/A N/A N/A 21.662±8.95 N/A 74.584±15.93 1.285±0.30 0.126±0.11 3.356±2.18 158.283±21.93 N/A 0.022±0.00 3.308±0.78
ENSMUST00000114637 N/A N/A N/A 0.145±0.17 5.736±0.00 N/A N/A 0.073±0.00 0.012±0.00 0.936±0.00 N/A N/A 0.027±0.00 N/A
ENSMUSG00000085493 ENSMUST00000136014 N/A N/A N/A 0.020±0.00 N/A N/A N/A 0.250±0.00 0.016±0.00 0.254±0.00 N/A N/A 0.016±0.01 3.164±0.80

Loading