C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000H2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000044096-ENSDARG00000077805 CGP 7955 17:43736425-43884193
GeneTranscriptPositionBiotype
ENSDARG00000044096 (NRBF2 (2 of 2))
nuclear receptor binding factor 2 		ENSDART00000064748 (NRBF2 (2 of 2)-201) 43736425-43742130 protein_coding
ENSDARG00000077805 (JMJD1C)
jumonji domain containing 1C 		ENSDART00000114523 (JMJD1C-201) 43747601-43884193 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0000H2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000148572-ENSG00000171988 CGP 9606 10:63133247-63465881
GeneTranscriptPositionBiotype
ENSG00000148572 (NRBF2)
nuclear receptor binding factor 2 		ENST00000277746 (NRBF2-001) 63133290-63155026 protein_coding
ENST00000435510 (NRBF2-201) 63133247-63155031 protein_coding
ENST00000611479 (NRBF2-202) 63133305-63154427 protein_coding
ENSG00000171988 (JMJD1C)
jumonji domain containing 1C 		ENST00000327520 (JMJD1C-002) 63176800-63207725 protein_coding
ENST00000399262 (JMJD1C-001) 63167221-63465881 protein_coding
ENST00000402544 (JMJD1C-010) 63167348-63269187 processed_transcript
ENST00000467356 (JMJD1C-003) 63167221-63176555 retained_intron
ENST00000469152 (JMJD1C-007) 63215424-63268875 processed_transcript
ENST00000483298 (JMJD1C-006) 63193110-63194694 processed_transcript
ENST00000489372 (JMJD1C-008) 63215438-63269253 processed_transcript
ENST00000490669 (JMJD1C-004) 63192939-63193649 processed_transcript
ENST00000497922 (JMJD1C-005) 63189287-63193337 processed_transcript
ENST00000542921 (JMJD1C-201) 63167590-63269066 protein_coding
ENSG00000221063 (MIR1296)
microRNA 1296 		ENST00000408136 (MIR1296-201) 63372942-63373053 miRNA
ENSG00000234369 (TATDN1P1)
TatD DNase domain containing 1 pseudogene 1 		ENST00000414123 (TATDN1P1-001) 63222155-63223045 processed_pseudogene
ENSG00000235816 (PRELID1P3)
PRELI domain containing 1 pseudogene 3 		ENST00000450055 (PRELID1P3-001) 63427297-63427939 processed_pseudogene
ENSG00000270421 (RP11-351O1.4)
 ENST00000602989 (RP11-351O1.4-001) 63358745-63359104 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000H2_0001ENSDARG00000044096ENSDART00000064748ENSDARG00000077805ENSDART00000114523CIL_0000H2_0002ENSG00000148572ENST00000277746ENST00000435510ENST00000611479ENSG00000171988ENST00000327520ENST00000399262ENST00000402544ENST00000467356ENST00000469152ENST00000483298ENST00000489372ENST00000490669ENST00000497922ENST00000542921ENSG00000221063ENST00000408136ENSG00000234369ENST00000414123ENSG00000235816ENST00000450055ENSG00000270421ENST00000602989
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000H2_0001ENSDARG00000044096ENSDART00000064748ENSDARG00000077805ENSDART00000114523CIL_0000H2_0002ENSG00000148572ENST00000277746ENST00000435510ENST00000611479ENSG00000171988ENST00000327520ENST00000399262ENST00000402544ENST00000467356ENST00000542921ENSG00000221063ENST00000408136ENSG00000234369ENST00000414123ENSG00000235816ENST00000450055ENSG00000270421ENST00000602989
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000044096 ENSDART00000064748 N/A N/A N/A 0.417±0.00 N/A N/A 2.823±2.04 2.112±0.00 1.431±0.00 N/A 1.537±0.00 N/A N/A N/A
ENSDARG00000077805 ENSDART00000114523 N/A N/A N/A 3.062±1.20 N/A N/A 1.731±0.64 0.754±0.21 0.213±0.00 N/A 0.735±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000148572 ENST00000277746 6.527±0.00 1.817±0.00 N/A 6.607±0.00 3.529±2.57 3.685±0.00 2.302±0.00 5.044±0.00 5.211±4.77 3.282±2.59 6.186±0.00 4.313±1.83 7.027±1.93 4.000±2.11
ENST00000435510 N/A 3.139±0.00 N/A 1.061±0.00 0.803±0.00 2.454±0.00 N/A N/A N/A N/A 1.046±0.00 N/A N/A 1.406±0.00
ENST00000611479 N/A N/A 1.152±0.00 N/A N/A N/A N/A N/A N/A 0.932±0.00 N/A 1.394±0.00 3.996±0.00 1.566±0.00
ENSG00000171988 ENST00000327520 N/A N/A N/A N/A 2.994±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000399262 1.871±0.00 1.467±0.00 N/A 1.011±0.00 1.622±0.49 1.878±0.86 0.854±0.00 1.701±0.00 0.716±0.00 2.139±0.70 1.195±0.22 3.814±2.24 0.973±0.37 4.225±0.86
ENST00000402544 N/A N/A N/A 0.715±0.00 N/A N/A N/A N/A N/A N/A 0.482±0.00 N/A N/A N/A
ENST00000467356 N/A 4.277±0.00 N/A N/A 3.383±0.00 N/A N/A 6.204±0.00 N/A N/A N/A 10.168±0.00 1.487±0.00 N/A
ENST00000469152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483298 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489372 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490669 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542921 2.665±0.00 1.355±0.00 N/A 1.243±0.00 2.482±1.30 2.204±0.00 1.264±0.05 0.855±0.00 2.011±0.00 4.561±0.00 0.642±0.00 1.893±0.68 N/A 2.517±0.00
ENSG00000221063 ENST00000408136 N/A N/A N/A 36.859±36.33 N/A N/A 30.048±0.00 N/A 0.417±0.00 N/A N/A N/A 1.229±0.00 N/A
ENSG00000234369 ENST00000414123 0.021±0.00 0.084±0.00 N/A 0.359±0.00 1.050±1.01 1.253±1.20 0.574±0.00 N/A 1.313±1.29 2.868±0.00 N/A N/A N/A N/A
ENSG00000235816 ENST00000450055 N/A N/A N/A 0.054±0.00 0.262±0.21 0.439±0.00 0.173±0.15 N/A 0.652±0.00 N/A N/A 0.073±0.04 N/A 0.039±0.02
ENSG00000270421 ENST00000602989 0.030±0.00 N/A N/A 0.029±0.00 2.727±2.51 0.607±0.00 N/A N/A 0.526±0.00 2.473±0.00 N/A 0.462±0.00 N/A 0.085±0.01

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