C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000NL_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000051957-ENSDARG00000059442 CGP 7955 5:72138191-72176308
GeneTranscriptPositionBiotype
ENSDARG00000051957 (selm)
selenoprotein M
ENSDART00000136656 (selm-001) 72138191-72147669 protein_coding
ENSDARG00000059442 (smtnb)
smoothelin b
ENSDART00000082614 (smtnb-201) 72151027-72165175 protein_coding
ENSDART00000144570 (smtnb-001) 72150092-72176308 protein_coding
ENSDART00000157238 (smtnb-002) 72172478-72176244 protein_coding
CIL_0000NL_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000075702-ENSMUSG00000020439 CGP 10090 11:3514684-3540612
GeneTranscriptPositionBiotype
ENSMUSG00000020439 (Smtn)
smoothelin
ENSMUST00000020718 (Smtn-002) 3517523-3527937 protein_coding
ENSMUST00000020721 (Smtn-001) 3517523-3539292 protein_coding
ENSMUST00000075118 (Smtn-003) 3517523-3539239 protein_coding
ENSMUST00000110011 (Smtn-009) 3517523-3537398 protein_coding
ENSMUST00000136243 (Smtn-006) 3532603-3539251 protein_coding
ENSMUST00000144635 (Smtn-005) 3520538-3522554 processed_transcript
ENSMUST00000151804 (Smtn-007) 3534814-3539249 processed_transcript
ENSMUST00000154861 (Smtn-004) 3517523-3539252 processed_transcript
ENSMUST00000156201 (Smtn-008) 3532460-3540612 protein_coding
ENSMUST00000170588 (Smtn-201) 3517523-3539292 protein_coding
ENSMUSG00000075702 (Selm)
selenoprotein M
ENSMUST00000094469 (Selm-001) 3514867-3517351 protein_coding
ENSMUST00000123677 (Selm-002) 3514684-3517348 processed_transcript
ENSMUST00000131865 (Selm-003) 3514702-3517130 processed_transcript
ENSMUSG00000087291 (Gm11946)
predicted gene 11946
ENSMUST00000123459 (Gm11946-002) 3530948-3536856 processed_transcript
ENSMUST00000128806 (Gm11946-001) 3530157-3536434 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NL_0001ENSDARG00000051957ENSDART00000136656ENSDARG00000059442ENSDART00000082614ENSDART00000144570ENSDART00000157238CIL_0000NL_0002ENSMUSG00000020439ENSMUST00000020718ENSMUST00000020721ENSMUST00000075118ENSMUST00000110011ENSMUST00000136243ENSMUST00000144635ENSMUST00000151804ENSMUST00000154861ENSMUST00000156201ENSMUST00000170588ENSMUSG00000075702ENSMUST00000094469ENSMUST00000123677ENSMUST00000131865ENSMUSG00000087291ENSMUST00000123459ENSMUST00000128806
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000NL_0001ENSDARG00000051957ENSDART00000136656ENSDARG00000059442ENSDART00000082614ENSDART00000144570CIL_0000NL_0002ENSMUSG00000020439ENSMUST00000020718ENSMUST00000020721ENSMUST00000075118ENSMUST00000110011ENSMUST00000154861ENSMUST00000156201ENSMUSG00000075702ENSMUST00000094469ENSMUST00000131865ENSMUSG00000087291ENSMUST00000123459
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000051957 ENSDART00000136656 N/A N/A N/A 14.835±1.03 N/A N/A 5.710±0.46 11.060±0.00 0.686±0.00 N/A 2.149±0.00 N/A N/A N/A
ENSDARG00000059442 ENSDART00000082614 N/A N/A N/A N/A N/A N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A
ENSDART00000144570 N/A N/A N/A 0.806±0.00 N/A N/A 6.139±0.58 0.263±0.02 N/A N/A 0.427±0.00 N/A N/A N/A
ENSDART00000157238 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020439 ENSMUST00000020718 N/A N/A N/A N/A 6.526±0.62 N/A N/A N/A N/A N/A 31.257±6.02 N/A N/A N/A
ENSMUST00000020721 4.829±0.81 2.493±0.95 N/A 2.638±0.17 3.090±0.75 N/A N/A 8.892±2.45 1.406±0.92 5.093±1.38 4.830±0.41 6.709±1.11 43.564±19.45 0.965±0.00
ENSMUST00000075118 18.229±11.63 2.648±0.77 340.804±0.00 1.752±0.00 2.292±0.28 19.844±9.53 N/A 2.814±0.17 0.413±0.03 3.652±0.87 N/A 12.833±7.52 21.511±2.15 0.887±0.29
ENSMUST00000110011 N/A N/A N/A N/A 1.513±0.00 N/A N/A N/A 0.256±0.00 N/A N/A N/A N/A N/A
ENSMUST00000136243 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151804 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154861 N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.00 N/A N/A N/A N/A N/A
ENSMUST00000156201 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.397±0.00
ENSMUST00000170588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000075702 ENSMUST00000094469 92.829±49.74 47.758±10.91 132.286±13.33 38.615±10.70 54.490±24.15 249.574±31.40 31.035±4.98 65.624±8.46 6.190±3.80 56.038±8.34 9.788±1.76 116.987±29.57 40.943±21.55 6.725±3.23
ENSMUST00000123677 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131865 N/A N/A N/A N/A N/A N/A N/A N/A 0.456±0.00 N/A N/A 1.484±0.00 1.118±0.43 0.099±0.00
ENSMUSG00000087291 ENSMUST00000123459 N/A 3.298±0.15 144.428±0.44 N/A 2.106±0.73 29.292±2.58 N/A 2.700±0.31 0.133±0.01 2.370±0.12 N/A N/A N/A N/A
ENSMUST00000128806 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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