C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sarcalumenin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000090500 Srl-002 ENSMUSG00000022519 10090 - 16:4480216-4523075 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000090500
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000090500 0.595±0.18 2.981±0.25 3.041±0.12 8.151±8.73 0.640±0.08 34.614±6.88 1.182±0.16 0.342±0.20 1.257±0.40 147.364±49.50 1.861±0.40 0.357±0.04 0.536±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OD CIL_0000OD_0002 CGP 16:4287529-4541816
CIL_00032P CIL_00032P_0002 CGP 16:4480216-4559720

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0016529 IEA sarcoplasmic reticulum

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000399609 SRL-001 protein_coding Homo_sapiens 0 1934
ENST00000537996 SRL-004 protein_coding Homo_sapiens 0 1857
ENST00000572111 SRL-002 nonsense_mediated_decay Homo_sapiens 0 1858

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