C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cold inducible RNA binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593093 CIRBP-002 ENSG00000099622 9606 + 19:1269332-1274807 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLungENST00000593093
Transcript ID Bladder Breast Colon Heart Lung
ENST00000593093 2.183±0.00 0.894±0.00 1.707±0.00 0.806±0.00 2.353±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QP CIL_0000QP_0001 CGP 19:1248553-1274880
CIL_0000QS CIL_0000QS_0001 CGP 19:1259384-1279249

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000105365 Cirbp-001 protein_coding Mus_musculus 0 200
ENSMUST00000151321 Cirbp-003 retained_intron Mus_musculus 8e-39 167
ENSMUST00000140774 Cirbp-002 retained_intron Mus_musculus 2e-30 139

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