C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S19, pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181937 Rps19-ps12-001 ENSMUSG00000097552 10090 - 16:79914460-79914889 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderPlacentaTestisENSMUST00000181937
Transcript ID Bladder Placenta Testis
ENSMUST00000181937 0.015±0.00 0.192±0.04 0.110±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R9 CIL_0000R9_0002 CGP 16:78953008-81624285

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000221975 RPS19-005 protein_coding Homo_sapiens 0 470
ENST00000405355 RP11-346C16.4-001 processed_pseudogene Homo_sapiens 0 351
ENST00000415286 RPS19P1-001 processed_pseudogene Homo_sapiens 0 409
ENST00000455650 RP11-445N18.3-001 processed_pseudogene Homo_sapiens 0 355
ENST00000457967 RP11-389O22.4-001 processed_pseudogene Homo_sapiens 0 309
ENST00000477321 RP11-289K10.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000480487 RPS19P3-001 processed_pseudogene Homo_sapiens 0 433
ENST00000593863 RPS19-006 protein_coding Homo_sapiens 0 470
ENST00000598399 RPS19-008 nonsense_mediated_decay Homo_sapiens 5.99994e-41 172
ENST00000598742 RPS19-001 protein_coding Homo_sapiens 0 470

Loading