C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: peptidylprolyl isomerase A (cyclophilin A) pseudogene 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358455 PPIAP22-001 ENSG00000198618 9606 + 21:18857779-18858276 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000358455
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000358455 0.063±0.00 0.066±0.00 0.468±0.36 0.067±0.00 0.061±0.00 0.030±0.00 0.100±0.00 1.100±0.00 0.095±0.00 0.057±0.00 1.327±1.46 0.062±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000R9 CIL_0000R9_0001 CGP 21:18269116-21543329

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000175860 Gm6061-001 processed_pseudogene Mus_musculus 0 710
ENSMUST00000132846 Ppia-001 protein_coding Mus_musculus 0 706
ENSMUST00000075723 Gm10123-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000120318 Gm13493-001 processed_pseudogene Mus_musculus 0 693
ENSMUST00000090749 Ppia-005 processed_transcript Mus_musculus 0 682
ENSMUST00000077747 Gm9234-201 processed_pseudogene Mus_musculus 0 665
ENSMUST00000178933 Gm5558-201 processed_pseudogene Mus_musculus 0 651
ENSMUST00000075293 E030024N20Rik-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000119740 Gm12728-001 translated_processed_pseudogene Mus_musculus 0 647
ENSMUST00000119389 Gm14046-001 processed_pseudogene Mus_musculus 0 645
ENSMUST00000099961 Gm6043-201 processed_pseudogene Mus_musculus 0 625
ENSMUST00000155824 Ppia-003 retained_intron Mus_musculus 0 621
ENSMUST00000081336 Gm6065-201 processed_pseudogene Mus_musculus 0 604
ENSMUST00000177265 Gm5777-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000120735 Gm5883-001 processed_pseudogene Mus_musculus 0 588
ENSMUST00000119751 Gm11469-001 processed_pseudogene Mus_musculus 0 577
ENSMUST00000137829 Ppia-002 retained_intron Mus_musculus 0 577
ENSMUST00000117621 Gm13750-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000186816 RP23-215C21.3-001 processed_pseudogene Mus_musculus 0 542
ENSMUST00000118678 Gm13679-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000121819 Gm6044-001 processed_pseudogene Mus_musculus 0 536
ENSMUST00000172723 Gm5967-001 processed_pseudogene Mus_musculus 0 532
ENSMUST00000119162 Gm15621-001 processed_pseudogene Mus_musculus 0 470
ENSMUST00000117298 Gm12842-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000121223 Gm12632-001 processed_pseudogene Mus_musculus 0 399
ENSMUST00000137540 Gclm-003 processed_transcript Mus_musculus 0 335
ENSMUST00000069552 Gm5160-201 protein_coding Mus_musculus 0 331
ENSMUST00000118166 Gm13454-001 processed_pseudogene Mus_musculus 0 316
ENSMUST00000121648 Gm6067-001 processed_pseudogene Mus_musculus 0 303
ENSMUST00000135789 Ppia-004 retained_intron Mus_musculus 0 263
ENSMUST00000185012 Gm12728-003 protein_coding Mus_musculus 0 263
ENSMUST00000184254 Gm12728-002 protein_coding Mus_musculus 0 263
ENSMUST00000188400 RP23-325F17.1-001 processed_pseudogene Mus_musculus 6e-32 141

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