C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000RZ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179008-ENSG00000179008 CGP 9606 14:60396469-60515543
GeneTranscriptPositionBiotype
ENSG00000179008 (C14orf39)
chromosome 14 open reading frame 39 		ENST00000321731 (C14orf39-001) 60435956-60486096 protein_coding
ENST00000498565 (C14orf39-002) 60396469-60455050 nonsense_mediated_decay
ENST00000555476 (C14orf39-004) 60471632-60486044 protein_coding
ENST00000556799 (C14orf39-005) 60478357-60515543 protein_coding
ENST00000557138 (C14orf39-003) 60436623-60486019 nonsense_mediated_decay
ENSG00000184302 (SIX6)
SIX homeobox 6 		ENST00000327720 (SIX6-001) 60508951-60512850 protein_coding
ENSG00000258427 (RBM8B)
RNA binding motif protein 8B pseudogene 		ENST00000555532 (RBM8B-001) 60397757-60398281 processed_pseudogene
ENSG00000258670 (RP11-1042B17.3)
 ENST00000557618 (RP11-1042B17.3-001) 60515119-60554916 antisense
ENSG00000258692 (SALL4P7)
spalt-like transcription factor 4 pseudogene 7 		ENST00000555779 (SALL4P7-001) 60493766-60496885 transcribed_processed_pseudogene
ENSG00000259169 (GNRHR2P1)
gonadotropin-releasing hormone (type 2) receptor 2 pseudogene 1 		ENST00000555315 (GNRHR2P1-001) 60398934-60400013 unprocessed_pseudogene
CIL_0000RZ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021098-ENSMUSG00000021099 CGP 10090 12:72881109-72944899
GeneTranscriptPositionBiotype
ENSMUSG00000021098 (4930447C04Rik)
RIKEN cDNA 4930447C04 gene 		ENSMUST00000044000 (4930447C04Rik-001) 72881109-72917906 protein_coding
ENSMUST00000110489 (4930447C04Rik-201) 72881109-72917760 protein_coding
ENSMUST00000130635 (4930447C04Rik-005) 72913187-72937977 protein_coding
ENSMUST00000131033 (4930447C04Rik-002) 72906234-72917857 nonsense_mediated_decay
ENSMUST00000132016 (4930447C04Rik-007) 72892924-72906271 processed_transcript
ENSMUST00000132067 (4930447C04Rik-003) 72913191-72940083 protein_coding
ENSMUST00000132901 (4930447C04Rik-008) 72892870-72906473 retained_intron
ENSMUST00000136075 (4930447C04Rik-004) 72911659-72940774 protein_coding
ENSMUST00000143960 (4930447C04Rik-006) 72892816-72906277 nonsense_mediated_decay
ENSMUSG00000021099 (Six6)
sine oculis-related homeobox 6 		ENSMUST00000021519 (Six6-001) 72939892-72944899 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000RZ_0001ENSG00000179008ENST00000321731ENST00000498565ENST00000555476ENST00000556799ENST00000557138ENSG00000184302ENST00000327720ENSG00000258427ENST00000555532ENSG00000258670ENST00000557618ENSG00000258692ENST00000555779ENSG00000259169ENST00000555315CIL_0000RZ_0002ENSMUSG00000021098ENSMUST00000044000ENSMUST00000110489ENSMUST00000130635ENSMUST00000131033ENSMUST00000132016ENSMUST00000132067ENSMUST00000132901ENSMUST00000136075ENSMUST00000143960ENSMUSG00000021099ENSMUST00000021519
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000RZ_0001ENSG00000179008ENST00000321731ENST00000555476ENST00000556799ENST00000557138ENSG00000184302ENST00000327720ENSG00000258427ENST00000555532ENSG00000258670ENST00000557618ENSG00000258692ENST00000555779ENSG00000259169ENST00000555315CIL_0000RZ_0002ENSMUSG00000021098ENSMUST00000044000ENSMUST00000110489ENSMUST00000131033ENSMUST00000132016ENSMUST00000132901ENSMUST00000136075ENSMUST00000143960ENSMUSG00000021099ENSMUST00000021519
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000179008 ENST00000321731 N/A 0.023±0.00 N/A 0.041±0.02 0.012±0.00 N/A N/A N/A N/A N/A 0.051±0.04 N/A 2.551±0.32
ENST00000498565 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555476 0.078±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.197±0.00 0.019±0.00 N/A 7.635±0.00
ENST00000556799 N/A N/A N/A N/A 0.193±0.00 N/A N/A N/A N/A N/A N/A 0.072±0.00 N/A
ENST00000557138 0.048±0.00 N/A 0.006±0.00 N/A 0.090±0.00 N/A N/A N/A N/A 0.238±0.09 N/A N/A N/A
ENSG00000184302 ENST00000327720 0.006±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.372±0.00 N/A N/A 0.061±0.00
ENSG00000258427 ENST00000555532 0.067±0.00 0.108±0.00 N/A N/A N/A N/A 0.038±0.00 N/A 0.083±0.01 N/A N/A N/A N/A
ENSG00000258670 ENST00000557618 0.340±0.00 0.815±0.00 0.687±0.00 0.478±0.00 0.228±0.00 0.160±0.06 0.425±0.00 0.071±0.00 0.479±0.00 0.012±0.00 0.097±0.06 N/A 0.295±0.16
ENSG00000258692 ENST00000555779 N/A N/A 0.014±0.00 0.057±0.00 N/A 0.007±0.00 N/A N/A N/A N/A 0.093±0.00 N/A 0.044±0.01
ENSG00000259169 ENST00000555315 N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021098 ENSMUST00000044000 N/A N/A N/A N/A N/A N/A N/A 0.233±0.03 N/A N/A N/A 0.036±0.00 0.805±0.00
ENSMUST00000110489 N/A N/A N/A 0.046±0.00 N/A N/A N/A N/A N/A 0.038±0.01 0.049±0.00 N/A N/A
ENSMUST00000130635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131033 0.090±0.00 N/A 0.865±0.21 0.165±0.12 N/A 0.023±0.00 0.040±0.00 0.244±0.08 N/A 0.034±0.02 0.112±0.01 0.499±0.48 0.797±0.11
ENSMUST00000132016 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.196±0.00 N/A N/A N/A
ENSMUST00000132067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132901 N/A 1.458±0.00 N/A N/A N/A 0.065±0.00 N/A N/A N/A 0.048±0.02 N/A N/A 2.535±0.00
ENSMUST00000136075 0.067±0.00 N/A 0.607±0.01 0.054±0.02 N/A 0.016±0.00 0.024±0.00 0.147±0.06 N/A N/A 0.036±0.00 0.084±0.00 N/A
ENSMUST00000143960 N/A N/A 2.369±0.00 N/A N/A 0.115±0.00 N/A N/A N/A 0.102±0.04 0.239±0.01 0.620±0.40 N/A
ENSMUSG00000021099 ENSMUST00000021519 N/A N/A 0.384±0.10 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Loading