| Transcript ID | Adipose | Muscle | Testis |
|---|---|---|---|
| ENST00000327720 | 0.006±0.00 | 0.372±0.00 | 0.061±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SIX homeobox 6 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000327720  |
SIX6-001 |
ENSG00000184302 |
9606 | + |
14:60508951-60512850  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0000S6 | CIL_0000S6_0001 | CGP | 14:60245752-60515543 |
| CIL_0008MW | CIL_0008MW_0001 | VISTA | 14:60353481-60955733 |
| CIL_0000RZ | CIL_0000RZ_0001 | CGP | 14:60396469-60515543 |
| CIL_00036B | CIL_00036B_0002 | CGP | 14:60508951-60658259 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0001205 | IEA | RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription |
| GO:0003677 | IEA | DNA binding |
| GO:0005515 | IEA | protein binding |
| GO:0005634 | IEA | nucleus |
| GO:0007601 | TAS | visual perception |
| GO:0009887 | TAS | organ morphogenesis |
| GO:0045944 | IEA | positive regulation of transcription from RNA polymerase II promoter |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000021519
|
Six6-001 | protein_coding | Mus_musculus | 0 | 1014 |
|
ENSMUST00000162695
|
Six3-004 | protein_coding | Mus_musculus | 0 | 479 |
|
ENSMUST00000176081
|
Six3-001 | protein_coding | Mus_musculus | 0 | 479 |
|
ENSMUST00000175898
|
Six3-002 | protein_coding | Mus_musculus | 0 | 479 |
|
ENSMUST00000132067
|
4930447C04Rik-003 | protein_coding | Mus_musculus | 1e-25 | 122 |
