C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0000TR_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000147133-ENSG00000147162 | CGP | 9606 | X:71366239-71575897  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000147133  (TAF1)TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 250kDa |
ENST00000276072 (TAF1-008)
|
71366305-71464046 | protein_coding | |
|
ENST00000373775 (TAF1-014)
|
71406679-71530361 | nonsense_mediated_decay | ||
|
ENST00000373790 (TAF1-009)
|
71366264-71466005 | protein_coding | ||
|
ENST00000423759 (TAF1-201)
|
71366239-71466004 | protein_coding | ||
|
ENST00000437147 (TAF1-010)
|
71406679-71530361 | nonsense_mediated_decay | ||
|
ENST00000461157 (TAF1-022)
|
71459592-71460960 | processed_transcript | ||
|
ENST00000461764 (TAF1-021)
|
71423158-71530361 | processed_transcript | ||
|
ENST00000462588 (TAF1-012)
|
71423158-71530355 | processed_transcript | ||
|
ENST00000463163 (TAF1-007)
|
71406646-71416737 | protein_coding | ||
|
ENST00000467309 (TAF1-016)
|
71459670-71532374 | processed_transcript | ||
|
ENST00000468167 (TAF1-011)
|
71423158-71530361 | processed_transcript | ||
|
ENST00000472567 (TAF1-005)
|
71387086-71388301 | retained_intron | ||
|
ENST00000474917 (TAF1-020)
|
71388589-71389630 | retained_intron | ||
|
ENST00000478305 (TAF1-006)
|
71387310-71389773 | retained_intron | ||
|
ENST00000482544 (TAF1-018)
|
71458273-71466504 | processed_transcript | ||
|
ENST00000483365 (TAF1-019)
|
71377007-71377985 | retained_intron | ||
|
ENST00000483985 (TAF1-017)
|
71394108-71406746 | protein_coding | ||
|
ENST00000485087 (TAF1-013)
|
71423158-71530360 | processed_transcript | ||
|
ENST00000492404 (TAF1-015)
|
71423978-71464313 | processed_transcript | ||
|
ENST00000497222 (TAF1-023)
|
71492312-71530525 | processed_transcript | ||
|
ENSG00000213018 (AL590762.11) |
ENST00000391782 (AL590762.11-001)
|
71420083-71420514 | processed_pseudogene | |
|
ENSG00000229601 (AL590762.10) |
ENST00000425885 (AL590762.10-001)
|
71413834-71414086 | processed_pseudogene | |
|
ENSG00000275975 (Metazoa_SRP) Metazoan signal recognition particle RNA |
ENST00000611704 (Metazoa_SRP.1-344)
|
71368666-71368968 | misc_RNA | |
| CIL_0000TR_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000031314-ENSMUSG00000034160 | CGP | 10090 | X:101532734-101684351 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000034160 (Ogt) O-linked N-acetylglucosamine (GlcNAc) transferase (UDP-N-acetylglucosamine:polypeptide-N-acetylglucosaminyl transferase) |
ENSMUST00000044475 (Ogt-001)
|
101640064-101684351 | protein_coding | |
|
ENSMUST00000119299 (Ogt-002)
|
101640060-101682940 | protein_coding | ||
|
ENSMUST00000147635 (Ogt-007)
|
101655345-101683158 | processed_transcript | ||
|
ENSMUST00000150161 (Ogt-004)
|
101640108-101654586 | retained_intron | ||
|
ENSMUST00000153979 (Ogt-006)
|
101640094-101654318 | processed_transcript | ||
|
ENSMUST00000155713 (Ogt-003)
|
101640062-101652877 | retained_intron | ||
|
ENSMUST00000155792 (Ogt-005)
|
101640140-101652894 | retained_intron | ||
Expression Patterns
|
