C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000391782 AL590762.11-001 ENSG00000213018 9606 - X:71420083-71420514 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000391782
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000391782 1.030±0.00 1.691±0.00 0.501±0.00 0.527±0.09 0.660±0.26 0.147±0.00 0.117±0.00 0.210±0.06 1.002±0.32 0.501±0.39 0.181±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066O CIL_00066O_0001 CGP X:71301734-71532374
CIL_0000TR CIL_0000TR_0001 CGP X:71366239-71575897

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134077 Gm20521-001 protein_coding Mus_musculus 0 580
ENSMUST00000172557 Pabpn1-009 protein_coding Mus_musculus 0 580
ENSMUST00000172695 Pabpn1-008 nonsense_mediated_decay Mus_musculus 0 580
ENSMUST00000022808 Pabpn1-001 protein_coding Mus_musculus 0 580
ENSMUST00000139985 Pabpn1-006 protein_coding Mus_musculus 0 529
ENSMUST00000141446 Pabpn1-005 protein_coding Mus_musculus 0 529
ENSMUST00000116476 Pabpn1-003 protein_coding Mus_musculus 0 529
ENSMUST00000140691 Pabpn1-004 protein_coding Mus_musculus 0 435
ENSMUST00000150975 Pabpn1-002 protein_coding Mus_musculus 0 368
ENSMUST00000146271 Pabpn1-007 protein_coding Mus_musculus 9.94922e-44 180

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