C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14253
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122112 Gm14253-001 ENSMUSG00000082321 10090 - 2:156347202-156347840 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122112 0.183±0.09 0.371±0.00 0.121±0.00 0.149±0.08 0.261±0.11 0.450±0.31 0.212±0.07 0.155±0.03 0.097±0.08 0.169±0.00 0.087±0.04 0.363±0.36 0.155±0.13 0.840±0.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000WS CIL_0000WS_0002 CGP 2:156311847-156375638
CIL_00056R CIL_00056R_0002 CGP 2:156312299-156543214

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000046902 pdcd10a-201 protein_coding Danio_rerio 0 499
ENSDART00000019063 pdcd10b-001 protein_coding Danio_rerio 0 438
ENST00000392750 PDCD10-001 protein_coding Homo_sapiens 0 987
ENST00000461494 PDCD10-012 protein_coding Homo_sapiens 0 987
ENST00000462725 PDCD10-013 protein_coding Homo_sapiens 0 675
ENST00000464360 PDCD10-010 protein_coding Homo_sapiens 0 366
ENST00000470131 PDCD10-005 protein_coding Homo_sapiens 0 987
ENST00000471885 PDCD10-008 protein_coding Homo_sapiens 0 854
ENST00000473645 PDCD10-003 protein_coding Homo_sapiens 0 987
ENST00000475915 PDCD10-014 protein_coding Homo_sapiens 0 935
ENST00000479121 PDCD10-018 protein_coding Homo_sapiens 0 501
ENST00000481136 PDCD10-004 retained_intron Homo_sapiens 0 241
ENST00000483451 PDCD10-011 retained_intron Homo_sapiens 0 597
ENST00000487947 PDCD10-017 protein_coding Homo_sapiens 0 854
ENST00000492139 PDCD10-009 protein_coding Homo_sapiens 0 610
ENST00000492396 PDCD10-016 protein_coding Homo_sapiens 0 830
ENST00000494502 PDCD10-007 nonsense_mediated_decay Homo_sapiens 0 337
ENST00000497056 PDCD10-002 protein_coding Homo_sapiens 0 987

Loading