C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S27a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000154932 rps27a-005 ENSDARG00000032725 7955 + 6:6188682-6190292 processed_transcript

Danio rerio EnsemblZv9

Genome
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Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000154932
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000154932 112.742±0.00 896.582±0.00 2.474±0.00 325.277±0.00 413.069±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z4 CIL_0000Z4_0001 CGP 6:6187501-6212328

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339647 UBC-001 protein_coding Homo_sapiens 2.00386e-43 182
ENST00000536769 UBC-007 protein_coding Homo_sapiens 2.99878e-43 182
ENST00000538617 UBC-003 protein_coding Homo_sapiens 9.94922e-44 182
ENST00000546120 UBC-201 protein_coding Homo_sapiens 6.02558e-44 182
ENST00000546846 RP3-432I18.1-001 processed_pseudogene Homo_sapiens 1e-16 90

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