C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000164_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000021826-ENSG00000178568 CGP 9606 2:210477682-212538841
GeneTranscriptPositionBiotype
ENSG00000021826 (CPS1)
carbamoyl-phosphate synthase 1, mitochondrial 		ENST00000233072 (CPS1-001) 210556538-210679107 protein_coding
ENST00000417946 (CPS1-002) 210477682-210576474 protein_coding
ENST00000430249 (CPS1-011) 210477709-210679107 protein_coding
ENST00000451903 (CPS1-003) 210593366-210679107 protein_coding
ENST00000467353 (CPS1-006) 210604965-210606771 retained_intron
ENST00000470791 (CPS1-008) 210658383-210663146 retained_intron
ENST00000479988 (CPS1-004) 210671615-210679107 retained_intron
ENST00000497121 (CPS1-007) 210631228-210647934 processed_transcript
ENST00000497163 (CPS1-005) 210577155-210579800 retained_intron
ENST00000518043 (CPS1-010) 210477682-210576474 protein_coding
ENST00000523702 (CPS1-009) 210477690-210577493 protein_coding
ENST00000619804 (CPS1-201) 210556734-210599555 protein_coding
ENSG00000178568 (ERBB4)
v-erb-b2 avian erythroblastic leukemia viral oncogene homolog 4 		ENST00000260943 (ERBB4-004) 211619253-212538529 protein_coding
ENST00000342788 (ERBB4-001) 211375717-212538841 protein_coding
ENST00000402597 (ERBB4-201) 211375717-212124915 protein_coding
ENST00000435846 (ERBB4-005) 211750699-212429247 protein_coding
ENST00000436443 (ERBB4-002) 211375721-212538841 protein_coding
ENST00000459774 (ERBB4-007) 212124584-212125181 retained_intron
ENST00000463121 (ERBB4-008) 211657597-211665354 processed_transcript
ENST00000484474 (ERBB4-006) 211725152-211960762 processed_transcript
ENST00000484594 (ERBB4-003) 211561762-212538582 retained_intron
ENSG00000231017 (AC013404.1)
 ENST00000413068 (AC013404.1-001) 211298941-211299189 processed_pseudogene
ENSG00000232631 (MTND2P23)
MT-ND2 pseudogene 23 		ENST00000422990 (MTND2P23-001) 211777206-211777856 processed_pseudogene
ENSG00000236007 (AC105921.5)
 ENST00000451639 (AC105921.5-001) 211778273-211779763 processed_pseudogene
CIL_000164_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025991-ENSMUSG00000062209 CGP 10090 1:67123026-69108059
GeneTranscriptPositionBiotype
ENSMUSG00000025991 (Cps1)
carbamoyl-phosphate synthetase 1 		ENSMUST00000027144 (Cps1-001) 67123026-67231259 protein_coding
ENSMUSG00000062209 (Erbb4)
v-erb-a erythroblastic leukemia viral oncogene homolog 4 (avian) 		ENSMUST00000119142 (Erbb4-002) 68032186-69107756 protein_coding
ENSMUST00000121473 (Erbb4-001) 68032186-69108059 protein_coding
ENSMUST00000126682 (Erbb4-003) 68298150-68330216 retained_intron
ENSMUST00000131148 (Erbb4-005) 68290155-68298318 processed_transcript
ENSMUST00000153432 (Erbb4-004) 68250655-69107756 protein_coding
ENSMUSG00000083795 (Gm15670)
predicted gene 15670 		ENSMUST00000117740 (Gm15670-001) 68293280-68293726 processed_pseudogene
ENSMUSG00000085075 (Gm15669)
predicted gene 15669 		ENSMUST00000147834 (Gm15669-001) 67792481-67805324 lincRNA
ENSMUSG00000086204 (Gm15668)
predicted gene 15668 		ENSMUST00000140506 (Gm15668-001) 67249200-67323609 lincRNA
ENSMUSG00000087329 (Gm15671)
predicted gene 15671 		ENSMUST00000124160 (Gm15671-001) 68024243-68025763 lincRNA
ENSMUSG00000087514 (Gm16076)
predicted gene 16076 		ENSMUST00000140116 (Gm16076-001) 69091913-69106740 sense_intronic
ENSMUSG00000096031 (Gm23189)
predicted gene, 23189 		ENSMUST00000178954 (Gm23189-201) 67973676-67973777 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000164_0001ENSG00000021826ENST00000233072ENST00000417946ENST00000430249ENST00000451903ENST00000467353ENST00000470791ENST00000479988ENST00000497121ENST00000497163ENST00000518043ENST00000523702ENST00000619804ENSG00000178568ENST00000260943ENST00000342788ENST00000402597ENST00000435846ENST00000436443ENST00000459774ENST00000463121ENST00000484474ENST00000484594ENSG00000231017ENST00000413068ENSG00000232631ENST00000422990ENSG00000236007ENST00000451639CIL_000164_0002ENSMUSG00000025991ENSMUST00000027144ENSMUSG00000062209ENSMUST00000119142ENSMUST00000121473ENSMUST00000126682ENSMUST00000131148ENSMUST00000153432ENSMUSG00000083795ENSMUST00000117740ENSMUSG00000085075ENSMUST00000147834ENSMUSG00000086204ENSMUST00000140506ENSMUSG00000087329ENSMUST00000124160ENSMUSG00000087514ENSMUST00000140116ENSMUSG00000096031ENSMUST00000178954
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000164_0001ENSG00000021826ENST00000233072ENST00000417946ENST00000430249ENST00000451903ENST00000479988ENST00000619804ENSG00000178568ENST00000260943ENST00000342788ENST00000402597ENST00000436443ENST00000459774ENST00000484594ENSG00000231017ENST00000413068ENSG00000232631ENST00000422990ENSG00000236007ENST00000451639CIL_000164_0002ENSMUSG00000025991ENSMUST00000027144ENSMUSG00000062209ENSMUST00000119142ENSMUST00000121473ENSMUST00000126682ENSMUST00000153432ENSMUSG00000083795ENSMUST00000117740ENSMUSG00000085075ENSMUST00000147834ENSMUSG00000086204ENSMUST00000140506ENSMUSG00000087329ENSMUST00000124160ENSMUSG00000087514ENSMUST00000140116ENSMUSG00000096031ENSMUST00000178954
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000021826 ENST00000233072 N/A N/A N/A 0.165±0.04 1.392±0.00 N/A N/A 382.814±0.00 N/A N/A N/A N/A 0.204±0.03 N/A
ENST00000417946 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.112±0.00 N/A N/A N/A
ENST00000430249 0.381±0.00 0.062±0.00 0.285±0.00 0.379±0.00 0.341±0.00 0.095±0.00 0.156±0.11 30.408±29.81 83.066±0.00 0.194±0.09 0.076±0.00 0.353±0.20 0.133±0.00 0.876±0.02
ENST00000451903 N/A 0.193±0.00 N/A N/A N/A 0.239±0.00 0.350±0.00 N/A N/A N/A 0.082±0.05 N/A N/A 3.905±0.08
ENST00000467353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000479988 0.070±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A 0.029±0.00 N/A N/A
ENST00000497121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497163 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518043 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523702 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619804 N/A N/A 0.537±0.00 1.994±0.00 0.822±0.29 0.680±0.00 0.404±0.00 284.413±0.00 0.620±0.00 N/A N/A N/A N/A N/A
ENSG00000178568 ENST00000260943 N/A N/A N/A N/A 0.378±0.00 N/A N/A N/A N/A N/A 1.395±0.00 N/A 0.029±0.02 N/A
ENST00000342788 N/A N/A 1.749±0.00 0.796±0.00 N/A N/A N/A N/A N/A N/A 0.220±0.00 0.089±0.00 N/A 0.677±0.29
ENST00000402597 N/A 0.062±0.00 N/A 1.396±0.00 0.331±0.07 0.052±0.03 N/A 0.352±0.34 0.002±0.00 0.205±0.00 0.314±0.00 0.084±0.00 0.014±0.01 0.256±0.08
ENST00000435846 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436443 N/A N/A N/A 1.945±0.00 N/A N/A 0.180±0.00 2.074±0.00 0.001±0.00 N/A 0.522±0.00 0.429±0.00 N/A 0.529±0.35
ENST00000459774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.099±0.00 N/A
ENST00000463121 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484594 N/A N/A 2.668±0.00 N/A 0.516±0.00 0.121±0.00 N/A N/A 0.554±0.00 N/A N/A 0.203±0.00 N/A N/A
ENSG00000231017 ENST00000413068 N/A N/A N/A 0.071±0.00 N/A 0.062±0.00 0.061±0.00 N/A N/A 0.122±0.00 0.116±0.00 0.840±0.00 N/A N/A
ENSG00000232631 ENST00000422990 N/A N/A N/A N/A 0.696±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236007 ENST00000451639 N/A N/A N/A 0.327±0.00 0.052±0.00 N/A 0.174±0.17 0.008±0.00 0.058±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025991 ENSMUST00000027144 0.074±0.06 0.142±0.02 0.015±0.01 0.044±0.02 1.081±0.11 0.717±0.23 0.066±0.06 0.019±0.01 310.381±264.09 0.117±0.07 0.026±0.02 0.198±0.21 0.165±0.12 0.144±0.04
ENSMUSG00000062209 ENSMUST00000119142 0.016±0.00 0.074±0.00 N/A 0.706±0.28 0.184±0.00 0.011±0.00 0.397±0.13 0.334±0.16 0.051±0.06 0.086±0.02 0.025±0.01 0.038±0.01 0.003±0.00 0.071±0.03
ENSMUST00000121473 0.029±0.00 0.079±0.03 0.029±0.00 1.756±0.39 0.135±0.06 N/A 0.211±0.00 0.937±0.30 0.126±0.08 0.084±0.03 N/A 0.094±0.05 0.000±0.00 0.055±0.00
ENSMUST00000126682 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.253±0.00 N/A N/A N/A N/A
ENSMUST00000131148 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153432 0.020±0.00 N/A N/A N/A N/A N/A 0.818±0.00 N/A 0.107±0.09 0.119±0.03 0.029±0.00 N/A N/A 0.091±0.02
ENSMUSG00000083795 ENSMUST00000117740 N/A N/A N/A N/A N/A N/A N/A 0.137±0.01 N/A N/A N/A N/A N/A N/A
ENSMUSG00000085075 ENSMUST00000147834 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.570±0.70
ENSMUSG00000086204 ENSMUST00000140506 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.061±0.00 N/A
ENSMUSG00000087329 ENSMUST00000124160 N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A 0.065±0.00 N/A N/A
ENSMUSG00000087514 ENSMUST00000140116 N/A N/A 0.050±0.00 0.188±0.00 N/A N/A 0.080±0.00 N/A 0.156±0.06 N/A N/A N/A 0.016±0.00 0.089±0.00
ENSMUSG00000096031 ENSMUST00000178954 N/A N/A 1475.705±151.80 819.860±77.18 N/A N/A N/A N/A 346.110±185.61 N/A N/A N/A N/A N/A

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