C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00017Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000003495-ENSDARG00000043170 CGP 7955 7:35660425-35851568
GeneTranscriptPositionBiotype
ENSDARG00000003495 (madd)
MAP-kinase activating death domain 		ENSDART00000047208 (madd-201) 35660425-35724091 protein_coding
ENSDARG00000043170 (nr1h3)
nuclear receptor subfamily 1, group H, member 3 		ENSDART00000063382 (nr1h3-201) 35756266-35776544 protein_coding
ENSDART00000123268 (nr1h3-202) 35756118-35776269 protein_coding
ENSDART00000130731 (nr1h3-203) 35757567-35851568 protein_coding
ENSDARG00000052947 (irx3a)
iroquois homeobox protein 3a 		ENSDART00000074895 (irx3a-201) 35811114-35814431 protein_coding
ENSDART00000113480 (irx3a-202) 35811114-35814390 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_00017Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040687-ENSMUSG00000002108 CGP 10090 2:91137360-91202834
GeneTranscriptPositionBiotype
ENSMUSG00000002108 (Nr1h3)
nuclear receptor subfamily 1, group H, member 3 		ENSMUST00000002177 (Nr1h3-001) 91184061-91195116 protein_coding
ENSMUST00000111354 (Nr1h3-002) 91184092-91195151 protein_coding
ENSMUST00000111355 (Nr1h3-003) 91184092-91194885 protein_coding
ENSMUST00000111356 (Nr1h3-007) 91184061-91195035 protein_coding
ENSMUST00000130031 (Nr1h3-005) 91184206-91192744 retained_intron
ENSMUST00000133261 (Nr1h3-008) 91190185-91190935 retained_intron
ENSMUST00000136234 (Nr1h3-006) 91192031-91202834 processed_transcript
ENSMUST00000150654 (Nr1h3-004) 91184061-91195025 retained_intron
ENSMUSG00000040687 (Madd)
MAP-kinase activating death domain 		ENSMUST00000066420 (Madd-013) 91161393-91183047 protein_coding
ENSMUST00000066473 (Madd-201) 91137361-91183818 protein_coding
ENSMUST00000075269 (Madd-005) 91137360-91183818 protein_coding
ENSMUST00000077941 (Madd-001) 91137360-91183818 protein_coding
ENSMUST00000099723 (Madd-010) 91137360-91182889 protein_coding
ENSMUST00000099725 (Madd-202) 91137360-91179321 protein_coding
ENSMUST00000111369 (Madd-008) 91137360-91179326 protein_coding
ENSMUST00000111370 (Madd-006) 91137360-91182848 protein_coding
ENSMUST00000111371 (Madd-004) 91137360-91183818 protein_coding
ENSMUST00000111372 (Madd-003) 91137360-91183818 protein_coding
ENSMUST00000111373 (Madd-009) 91137360-91179315 protein_coding
ENSMUST00000111375 (Madd-007) 91137360-91179317 protein_coding
ENSMUST00000111376 (Madd-011) 91137360-91182888 protein_coding
ENSMUST00000111381 (Madd-002) 91137360-91183818 protein_coding
ENSMUST00000125227 (Madd-025) 91137361-91183818 processed_transcript
ENSMUST00000125321 (Madd-023) 91137361-91183818 processed_transcript
ENSMUST00000130395 (Madd-014) 91161046-91183026 retained_intron
ENSMUST00000130591 (Madd-019) 91143042-91154951 retained_intron
ENSMUST00000132791 (Madd-020) 91152147-91154795 retained_intron
ENSMUST00000135715 (Madd-015) 91177637-91183837 retained_intron
ENSMUST00000135910 (Madd-026) 91143271-91152491 retained_intron
ENSMUST00000140600 (Madd-017) 91167816-91175729 protein_coding
ENSMUST00000146097 (Madd-018) 91155558-91160357 retained_intron
ENSMUST00000150461 (Madd-022) 91137361-91183818 processed_transcript
ENSMUST00000150517 (Madd-016) 91178449-91183039 processed_transcript
ENSMUST00000153688 (Madd-024) 91137361-91183818 processed_transcript
ENSMUST00000154028 (Madd-012) 91137361-91183818 processed_transcript
ENSMUST00000156368 (Madd-021) 91138350-91139256 retained_intron
ENSMUSG00000088018 (Gm23390)
predicted gene, 23390 		ENSMUST00000157393 (Gm23390-201) 91200162-91200267 snRNA

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017Z_0001ENSDARG00000003495ENSDART00000047208ENSDARG00000043170ENSDART00000063382ENSDART00000123268ENSDART00000130731ENSDARG00000052947ENSDART00000074895ENSDART00000113480CIL_00017Z_0002ENSMUSG00000002108ENSMUST00000002177ENSMUST00000111354ENSMUST00000111355ENSMUST00000111356ENSMUST00000130031ENSMUST00000133261ENSMUST00000136234ENSMUST00000150654ENSMUSG00000040687ENSMUST00000066420ENSMUST00000066473ENSMUST00000075269ENSMUST00000077941ENSMUST00000099723ENSMUST00000099725ENSMUST00000111369ENSMUST00000111370ENSMUST00000111371ENSMUST00000111372ENSMUST00000111373ENSMUST00000111375ENSMUST00000111376ENSMUST00000111381ENSMUST00000125227ENSMUST00000125321ENSMUST00000130395ENSMUST00000130591ENSMUST00000132791ENSMUST00000135715ENSMUST00000135910ENSMUST00000140600ENSMUST00000146097ENSMUST00000150461ENSMUST00000150517ENSMUST00000153688ENSMUST00000154028ENSMUST00000156368ENSMUSG00000088018ENSMUST00000157393
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017Z_0001ENSDARG00000003495ENSDART00000047208ENSDARG00000043170ENSDART00000063382ENSDART00000123268ENSDART00000130731ENSDARG00000052947ENSDART00000074895ENSDART00000113480CIL_00017Z_0002ENSMUSG00000002108ENSMUST00000002177ENSMUST00000111354ENSMUST00000111355ENSMUST00000111356ENSMUST00000130031ENSMUST00000150654ENSMUSG00000040687ENSMUST00000066420ENSMUST00000066473ENSMUST00000077941ENSMUST00000099723ENSMUST00000099725ENSMUST00000111369ENSMUST00000111370ENSMUST00000111372ENSMUST00000111373ENSMUST00000111375ENSMUST00000111376ENSMUST00000111381ENSMUST00000125321ENSMUST00000130395ENSMUST00000154028ENSMUSG00000088018ENSMUST00000157393
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003495 ENSDART00000047208 N/A N/A N/A 29.027±0.00 N/A N/A 9.547±3.41 2.040±0.58 0.291±0.00 N/A 2.883±0.00 N/A N/A N/A
ENSDARG00000043170 ENSDART00000063382 N/A N/A N/A 3.206±0.00 N/A N/A 2.648±0.00 2.120±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000123268 N/A N/A N/A 6.530±1.94 N/A N/A 3.415±1.50 4.799±0.28 0.468±0.00 N/A 2.331±0.00 N/A N/A N/A
ENSDART00000130731 N/A N/A N/A N/A N/A N/A N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A
ENSDARG00000052947 ENSDART00000074895 N/A N/A N/A 8.864±3.66 N/A N/A 1.098±0.59 1.479±0.74 N/A N/A 0.605±0.00 N/A N/A N/A
ENSDART00000113480 N/A N/A N/A 4.192±0.49 N/A N/A 0.318±0.03 0.130±0.11 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002108 ENSMUST00000002177 24.032±8.43 8.396±2.42 4.706±0.02 0.645±0.08 11.151±2.31 3.035±0.00 3.287±0.17 10.460±1.30 18.064±11.24 17.184±1.56 2.987±1.45 3.236±0.78 4.021±3.56 1.627±0.50
ENSMUST00000111354 36.118±20.15 15.279±4.61 2.531±0.32 0.241±0.06 39.104±9.63 13.326±4.53 5.894±1.06 28.504±3.43 33.679±26.12 19.748±7.00 3.518±0.79 7.750±3.46 3.784±2.35 6.610±2.99
ENSMUST00000111355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.077±0.00 0.955±0.00 1.953±0.00
ENSMUST00000111356 N/A N/A 1.185±0.00 0.269±0.00 N/A 1.585±0.00 1.414±0.00 N/A 2.807±0.76 N/A 1.157±0.06 1.559±0.17 0.529±0.00 N/A
ENSMUST00000130031 N/A 4.853±1.10 1.551±0.00 0.354±0.15 7.967±0.00 2.071±0.00 1.793±0.10 N/A N/A 7.372±0.01 1.102±0.00 1.762±0.59 1.018±0.00 N/A
ENSMUST00000133261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.536±0.00 N/A
ENSMUSG00000040687 ENSMUST00000066420 1.754±0.00 3.336±0.60 N/A N/A 3.384±0.44 3.296±0.57 0.734±0.00 1.155±0.00 1.048±0.00 N/A N/A 2.412±0.73 N/A 1.269±0.48
ENSMUST00000066473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.685±0.00 N/A N/A
ENSMUST00000075269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000077941 N/A 0.790±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000099723 0.860±0.00 N/A N/A 4.772±0.73 N/A N/A N/A 0.903±0.00 0.608±0.00 N/A 0.284±0.00 1.110±0.00 N/A N/A
ENSMUST00000099725 N/A N/A N/A 8.426±4.64 3.697±1.40 2.445±0.97 0.710±0.26 1.034±0.38 1.489±0.00 3.865±1.16 N/A 1.495±0.47 N/A N/A
ENSMUST00000111369 N/A N/A 0.910±0.00 N/A N/A N/A 0.544±0.00 0.654±0.00 N/A N/A 0.347±0.00 1.629±0.52 0.781±0.00 N/A
ENSMUST00000111370 0.879±0.02 N/A 1.318±0.00 19.353±6.04 1.970±0.34 2.386±0.23 N/A 1.396±0.27 1.157±0.52 2.864±0.00 0.276±0.05 1.503±0.46 0.587±0.20 0.774±0.07
ENSMUST00000111371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111372 1.269±0.25 N/A 2.087±0.30 N/A 3.253±0.84 N/A 1.048±0.00 1.930±0.57 3.124±2.48 3.789±0.82 0.287±0.08 1.843±0.55 0.715±0.25 1.232±0.41
ENSMUST00000111373 1.116±0.50 N/A N/A N/A 1.850±0.10 N/A 0.542±0.11 1.154±0.15 1.290±0.40 2.085±0.00 0.269±0.00 1.379±0.45 0.496±0.17 0.770±0.09
ENSMUST00000111375 0.821±0.07 N/A 1.480±0.00 N/A 3.133±0.00 N/A N/A N/A 0.600±0.15 N/A 0.251±0.07 1.044±0.02 0.868±0.44 N/A
ENSMUST00000111376 0.764±0.00 N/A N/A N/A N/A N/A N/A 0.795±0.00 N/A N/A 0.359±0.04 1.614±0.00 N/A 0.487±0.00
ENSMUST00000111381 1.579±0.00 1.025±0.20 N/A N/A 2.606±0.00 1.696±0.45 0.658±0.11 N/A N/A 3.208±0.76 N/A N/A N/A N/A
ENSMUST00000125227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125321 N/A N/A N/A N/A 1.406±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.615±0.00 N/A N/A
ENSMUST00000130591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A 0.327±0.00 N/A
ENSMUST00000156368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088018 ENSMUST00000157393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.091±0.00 N/A N/A

Loading