C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00017Z_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000003495-ENSDARG00000043170 CGP 7955 7:35660425-35851568
GeneTranscriptPositionBiotype
ENSDARG00000003495 (madd)
MAP-kinase activating death domain 		ENSDART00000047208 (madd-201) 35660425-35724091 protein_coding
ENSDARG00000043170 (nr1h3)
nuclear receptor subfamily 1, group H, member 3 		ENSDART00000063382 (nr1h3-201) 35756266-35776544 protein_coding
ENSDART00000123268 (nr1h3-202) 35756118-35776269 protein_coding
ENSDART00000130731 (nr1h3-203) 35757567-35851568 protein_coding
ENSDARG00000052947 (irx3a)
iroquois homeobox protein 3a 		ENSDART00000074895 (irx3a-201) 35811114-35814431 protein_coding
ENSDART00000113480 (irx3a-202) 35811114-35814390 protein_coding
CIL_00017Z_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000040687-ENSMUSG00000002108 CGP 10090 2:91137360-91202834
GeneTranscriptPositionBiotype
ENSMUSG00000002108 (Nr1h3)
nuclear receptor subfamily 1, group H, member 3 		ENSMUST00000002177 (Nr1h3-001) 91184061-91195116 protein_coding
ENSMUST00000111354 (Nr1h3-002) 91184092-91195151 protein_coding
ENSMUST00000111355 (Nr1h3-003) 91184092-91194885 protein_coding
ENSMUST00000111356 (Nr1h3-007) 91184061-91195035 protein_coding
ENSMUST00000130031 (Nr1h3-005) 91184206-91192744 retained_intron
ENSMUST00000133261 (Nr1h3-008) 91190185-91190935 retained_intron
ENSMUST00000136234 (Nr1h3-006) 91192031-91202834 processed_transcript
ENSMUST00000150654 (Nr1h3-004) 91184061-91195025 retained_intron
ENSMUSG00000040687 (Madd)
MAP-kinase activating death domain 		ENSMUST00000066420 (Madd-013) 91161393-91183047 protein_coding
ENSMUST00000066473 (Madd-201) 91137361-91183818 protein_coding
ENSMUST00000075269 (Madd-005) 91137360-91183818 protein_coding
ENSMUST00000077941 (Madd-001) 91137360-91183818 protein_coding
ENSMUST00000099723 (Madd-010) 91137360-91182889 protein_coding
ENSMUST00000099725 (Madd-202) 91137360-91179321 protein_coding
ENSMUST00000111369 (Madd-008) 91137360-91179326 protein_coding
ENSMUST00000111370 (Madd-006) 91137360-91182848 protein_coding
ENSMUST00000111371 (Madd-004) 91137360-91183818 protein_coding
ENSMUST00000111372 (Madd-003) 91137360-91183818 protein_coding
ENSMUST00000111373 (Madd-009) 91137360-91179315 protein_coding
ENSMUST00000111375 (Madd-007) 91137360-91179317 protein_coding
ENSMUST00000111376 (Madd-011) 91137360-91182888 protein_coding
ENSMUST00000111381 (Madd-002) 91137360-91183818 protein_coding
ENSMUST00000125227 (Madd-025) 91137361-91183818 processed_transcript
ENSMUST00000125321 (Madd-023) 91137361-91183818 processed_transcript
ENSMUST00000130395 (Madd-014) 91161046-91183026 retained_intron
ENSMUST00000130591 (Madd-019) 91143042-91154951 retained_intron
ENSMUST00000132791 (Madd-020) 91152147-91154795 retained_intron
ENSMUST00000135715 (Madd-015) 91177637-91183837 retained_intron
ENSMUST00000135910 (Madd-026) 91143271-91152491 retained_intron
ENSMUST00000140600 (Madd-017) 91167816-91175729 protein_coding
ENSMUST00000146097 (Madd-018) 91155558-91160357 retained_intron
ENSMUST00000150461 (Madd-022) 91137361-91183818 processed_transcript
ENSMUST00000150517 (Madd-016) 91178449-91183039 processed_transcript
ENSMUST00000153688 (Madd-024) 91137361-91183818 processed_transcript
ENSMUST00000154028 (Madd-012) 91137361-91183818 processed_transcript
ENSMUST00000156368 (Madd-021) 91138350-91139256 retained_intron
ENSMUSG00000088018 (Gm23390)
predicted gene, 23390 		ENSMUST00000157393 (Gm23390-201) 91200162-91200267 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017Z_0001ENSDARG00000003495ENSDART00000047208ENSDARG00000043170ENSDART00000063382ENSDART00000123268ENSDART00000130731ENSDARG00000052947ENSDART00000074895ENSDART00000113480CIL_00017Z_0002ENSMUSG00000002108ENSMUST00000002177ENSMUST00000111354ENSMUST00000111355ENSMUST00000111356ENSMUST00000130031ENSMUST00000133261ENSMUST00000136234ENSMUST00000150654ENSMUSG00000040687ENSMUST00000066420ENSMUST00000066473ENSMUST00000075269ENSMUST00000077941ENSMUST00000099723ENSMUST00000099725ENSMUST00000111369ENSMUST00000111370ENSMUST00000111371ENSMUST00000111372ENSMUST00000111373ENSMUST00000111375ENSMUST00000111376ENSMUST00000111381ENSMUST00000125227ENSMUST00000125321ENSMUST00000130395ENSMUST00000130591ENSMUST00000132791ENSMUST00000135715ENSMUST00000135910ENSMUST00000140600ENSMUST00000146097ENSMUST00000150461ENSMUST00000150517ENSMUST00000153688ENSMUST00000154028ENSMUST00000156368ENSMUSG00000088018ENSMUST00000157393
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017Z_0001ENSDARG00000003495ENSDART00000047208ENSDARG00000043170ENSDART00000063382ENSDART00000123268ENSDART00000130731ENSDARG00000052947ENSDART00000074895ENSDART00000113480CIL_00017Z_0002ENSMUSG00000002108ENSMUST00000002177ENSMUST00000111354ENSMUST00000111355ENSMUST00000111356ENSMUST00000130031ENSMUST00000150654ENSMUSG00000040687ENSMUST00000066420ENSMUST00000066473ENSMUST00000077941ENSMUST00000099723ENSMUST00000099725ENSMUST00000111369ENSMUST00000111370ENSMUST00000111372ENSMUST00000111373ENSMUST00000111375ENSMUST00000111376ENSMUST00000111381ENSMUST00000125321ENSMUST00000130395ENSMUST00000154028ENSMUSG00000088018ENSMUST00000157393
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000003495 ENSDART00000047208 N/A N/A N/A 29.027±0.00 N/A N/A 9.547±3.41 2.040±0.58 0.291±0.00 N/A 2.883±0.00 N/A N/A N/A
ENSDARG00000043170 ENSDART00000063382 N/A N/A N/A 3.206±0.00 N/A N/A 2.648±0.00 2.120±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000123268 N/A N/A N/A 6.530±1.94 N/A N/A 3.415±1.50 4.799±0.28 0.468±0.00 N/A 2.331±0.00 N/A N/A N/A
ENSDART00000130731 N/A N/A N/A N/A N/A N/A N/A N/A 0.492±0.00 N/A N/A N/A N/A N/A
ENSDARG00000052947 ENSDART00000074895 N/A N/A N/A 8.864±3.66 N/A N/A 1.098±0.59 1.479±0.74 N/A N/A 0.605±0.00 N/A N/A N/A
ENSDART00000113480 N/A N/A N/A 4.192±0.49 N/A N/A 0.318±0.03 0.130±0.11 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000002108 ENSMUST00000002177 24.032±8.43 8.396±2.42 4.706±0.02 0.645±0.08 11.151±2.31 3.035±0.00 3.287±0.17 10.460±1.30 18.064±11.24 17.184±1.56 2.987±1.45 3.236±0.78 4.021±3.56 1.627±0.50
ENSMUST00000111354 36.118±20.15 15.279±4.61 2.531±0.32 0.241±0.06 39.104±9.63 13.326±4.53 5.894±1.06 28.504±3.43 33.679±26.12 19.748±7.00 3.518±0.79 7.750±3.46 3.784±2.35 6.610±2.99
ENSMUST00000111355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.077±0.00 0.955±0.00 1.953±0.00
ENSMUST00000111356 N/A N/A 1.185±0.00 0.269±0.00 N/A 1.585±0.00 1.414±0.00 N/A 2.807±0.76 N/A 1.157±0.06 1.559±0.17 0.529±0.00 N/A
ENSMUST00000130031 N/A 4.853±1.10 1.551±0.00 0.354±0.15 7.967±0.00 2.071±0.00 1.793±0.10 N/A N/A 7.372±0.01 1.102±0.00 1.762±0.59 1.018±0.00 N/A
ENSMUST00000133261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136234 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150654 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.536±0.00 N/A
ENSMUSG00000040687 ENSMUST00000066420 1.754±0.00 3.336±0.60 N/A N/A 3.384±0.44 3.296±0.57 0.734±0.00 1.155±0.00 1.048±0.00 N/A N/A 2.412±0.73 N/A 1.269±0.48
ENSMUST00000066473 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.685±0.00 N/A N/A
ENSMUST00000075269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000077941 N/A 0.790±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000099723 0.860±0.00 N/A N/A 4.772±0.73 N/A N/A N/A 0.903±0.00 0.608±0.00 N/A 0.284±0.00 1.110±0.00 N/A N/A
ENSMUST00000099725 N/A N/A N/A 8.426±4.64 3.697±1.40 2.445±0.97 0.710±0.26 1.034±0.38 1.489±0.00 3.865±1.16 N/A 1.495±0.47 N/A N/A
ENSMUST00000111369 N/A N/A 0.910±0.00 N/A N/A N/A 0.544±0.00 0.654±0.00 N/A N/A 0.347±0.00 1.629±0.52 0.781±0.00 N/A
ENSMUST00000111370 0.879±0.02 N/A 1.318±0.00 19.353±6.04 1.970±0.34 2.386±0.23 N/A 1.396±0.27 1.157±0.52 2.864±0.00 0.276±0.05 1.503±0.46 0.587±0.20 0.774±0.07
ENSMUST00000111371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000111372 1.269±0.25 N/A 2.087±0.30 N/A 3.253±0.84 N/A 1.048±0.00 1.930±0.57 3.124±2.48 3.789±0.82 0.287±0.08 1.843±0.55 0.715±0.25 1.232±0.41
ENSMUST00000111373 1.116±0.50 N/A N/A N/A 1.850±0.10 N/A 0.542±0.11 1.154±0.15 1.290±0.40 2.085±0.00 0.269±0.00 1.379±0.45 0.496±0.17 0.770±0.09
ENSMUST00000111375 0.821±0.07 N/A 1.480±0.00 N/A 3.133±0.00 N/A N/A N/A 0.600±0.15 N/A 0.251±0.07 1.044±0.02 0.868±0.44 N/A
ENSMUST00000111376 0.764±0.00 N/A N/A N/A N/A N/A N/A 0.795±0.00 N/A N/A 0.359±0.04 1.614±0.00 N/A 0.487±0.00
ENSMUST00000111381 1.579±0.00 1.025±0.20 N/A N/A 2.606±0.00 1.696±0.45 0.658±0.11 N/A N/A 3.208±0.76 N/A N/A N/A N/A
ENSMUST00000125227 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000125321 N/A N/A N/A N/A 1.406±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.615±0.00 N/A N/A
ENSMUST00000130591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135715 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135910 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140600 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153688 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.186±0.00 N/A 0.327±0.00 N/A
ENSMUST00000156368 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000088018 ENSMUST00000157393 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.091±0.00 N/A N/A

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