C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001D1_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000100106-ENSG00000189060 CGP 9606 22:37697004-37807436
GeneTranscriptPositionBiotype
ENSG00000100101 (RP1-37E16.12)
Uncharacterized protein {ECO:0000313|Ensembl:ENSP00000477208} 		ENST00000455236 (RP1-37E16.12-001) 37686414-37774130 nonsense_mediated_decay
ENSG00000189060 (H1F0)
H1 histone family, member 0 		ENST00000340857 (H1F0-001) 37805093-37807436 protein_coding

Homo sapiens Ensembl (GRCh38)

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CIL_0001D1_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000033088-ENSMUSG00000096210 CGP 10090 15:78947724-79030498
GeneTranscriptPositionBiotype
ENSMUSG00000033088 (Triobp)
TRIO and F-actin binding protein 		ENSMUST00000109687 (Triobp-005) 78983041-79005864 protein_coding
ENSMUST00000109688 (Triobp-201) 78983056-79005862 protein_coding
ENSMUST00000109689 (Triobp-002) 78947724-79005867 protein_coding
ENSMUST00000109690 (Triobp-001) 78947724-79005565 protein_coding
ENSMUST00000129922 (Triobp-008) 79002182-79004697 processed_transcript
ENSMUST00000130663 (Triobp-007) 78983077-78994859 protein_coding
ENSMUST00000137934 (Triobp-004) 78948245-78953255 retained_intron
ENSMUST00000140228 (Triobp-003) 78947724-78968842 processed_transcript
ENSMUST00000144151 (Triobp-006) 78983705-78991438 protein_coding
ENSMUSG00000096210 (H1f0)
H1 histone family, member 0 		ENSMUST00000180086 (H1f0-201) 79028212-79030498 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001D1_0001ENSG00000100101ENST00000455236ENSG00000189060ENST00000340857CIL_0001D1_0002ENSMUSG00000033088ENSMUST00000109687ENSMUST00000109688ENSMUST00000109689ENSMUST00000109690ENSMUST00000129922ENSMUST00000130663ENSMUST00000137934ENSMUST00000140228ENSMUST00000144151ENSMUSG00000096210ENSMUST00000180086
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001D1_0001ENSG00000100101ENST00000455236ENSG00000189060ENST00000340857CIL_0001D1_0002ENSMUSG00000033088ENSMUST00000109687ENSMUST00000109688ENSMUST00000109689ENSMUST00000109690ENSMUST00000129922ENSMUSG00000096210ENSMUST00000180086
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000100101 ENST00000455236 N/A N/A 0.264±0.00 N/A N/A N/A 0.236±0.00 N/A N/A N/A 0.645±0.00 N/A N/A N/A
ENSG00000189060 ENST00000340857 52.661±0.00 108.612±0.00 5.669±0.00 31.136±24.95 29.797±21.24 33.910±26.99 26.621±23.91 48.322±29.25 43.652±40.00 20.410±18.05 22.084±12.27 84.906±63.91 49.651±10.69 41.802±11.97
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000033088 ENSMUST00000109687 12.544±4.59 N/A 4.808±0.86 N/A 22.751±6.47 10.373±0.92 4.199±0.00 5.392±0.00 3.767±2.07 8.701±1.12 N/A 31.371±0.00 5.609±0.00 N/A
ENSMUST00000109688 26.519±7.82 54.794±5.29 18.730±0.09 8.000±4.85 23.906±11.93 26.160±5.27 8.425±1.35 18.166±2.97 11.672±4.07 15.910±1.91 9.339±1.33 37.311±16.67 32.656±9.70 9.187±3.86
ENSMUST00000109689 N/A N/A N/A 2.749±1.79 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109690 N/A N/A N/A 4.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129922 N/A N/A N/A 5.399±0.00 N/A N/A N/A N/A N/A N/A N/A 70.366±0.00 88.036±1.79 15.745±0.00
ENSMUST00000130663 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144151 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000096210 ENSMUST00000180086 46.266±13.30 82.681±15.21 46.720±3.53 68.556±42.80 44.704±16.39 136.204±17.86 25.901±2.52 70.903±8.41 53.175±15.44 56.944±7.21 49.090±1.99 79.929±26.78 55.851±18.52 5.011±2.13

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