C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: NLR family, CARD domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000163478 Nlrc3-003 ENSMUSG00000049871 10090 - 16:3948879-3964207 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaENSMUST00000163478
Transcript ID Ovary Placenta
ENSMUST00000163478 0.299±0.07 0.373±0.18

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DL CIL_0001DL_0002 CGP 16:3908801-3976632
CIL_0000AZ CIL_0000AZ_0002 CGP 16:3945007-4003770

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324659 NLRC3-007 protein_coding Homo_sapiens 0 874
ENST00000359128 NLRC3-001 protein_coding Homo_sapiens 0 874
ENST00000448023 NLRC3-201 protein_coding Homo_sapiens 0 874
ENST00000615877 NLRC3-002 nonsense_mediated_decay Homo_sapiens 0 614
ENST00000618137 NLRC3-004 protein_coding Homo_sapiens 0 372

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