C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001IU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000036471-ENSDARG00000043226 CGP 7955 1:52320998-52595159
GeneTranscriptPositionBiotype
ENSDARG00000036471 (dand5)
DAN domain family, member 5 		ENSDART00000052992 (dand5-001) 52320998-52323243 protein_coding
ENSDARG00000043226 (nfixa)
nuclear factor I/Xa 		ENSDART00000121795 (nfixa-201) 52397904-52595159 protein_coding
ENSDART00000135861 (nfixa-001) 52397365-52455684 protein_coding
ENSDARG00000092443 (si:ch211-145g9.5)
si:ch211-145g9.5 		ENSDART00000141773 (si:ch211-145g9.5-001) 52363019-52370826 processed_transcript
CIL_0001IU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000179284-ENSG00000008441 CGP 9606 19:12965159-13098796
GeneTranscriptPositionBiotype
ENSG00000008441 (NFIX)
nuclear factor I/X (CCAAT-binding transcription factor) 		ENST00000358552 (NFIX-201) 13024580-13098766 protein_coding
ENST00000360105 (NFIX-003) 13024580-13098796 protein_coding
ENST00000397661 (NFIX-001) 12995608-13096201 protein_coding
ENST00000585382 (NFIX-009) 13012207-13081835 nonsense_mediated_decay
ENST00000585575 (NFIX-006) 13024032-13094649 protein_coding
ENST00000586797 (NFIX-005) 13024585-13094684 nonsense_mediated_decay
ENST00000586873 (NFIX-011) 13024627-13025510 protein_coding
ENST00000587260 (NFIX-007) 13024939-13094770 protein_coding
ENST00000587760 (NFIX-002) 13023991-13094758 protein_coding
ENST00000588228 (NFIX-004) 13024581-13094755 protein_coding
ENST00000588680 (NFIX-012) 13070003-13074019 processed_transcript
ENST00000590027 (NFIX-008) 13012188-13025520 protein_coding
ENST00000591028 (NFIX-010) 13024613-13025495 protein_coding
ENST00000592199 (NFIX-013) 12995838-13094649 protein_coding
ENSG00000179284 (DAND5)
DAN domain family member 5, BMP antagonist 		ENST00000317060 (DAND5-001) 12969482-12974762 protein_coding
ENST00000585548 (DAND5-002) 12965159-12974524 protein_coding
ENSG00000267417 (CTC-239J10.1)
 ENST00000586630 (CTC-239J10.1-001) 13013662-13014511 antisense
ENSG00000279044 (AC007787.3)
 ENST00000625100 (AC007787.3-001) 13081966-13082564 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IU_0001ENSDARG00000036471ENSDART00000052992ENSDARG00000043226ENSDART00000121795ENSDART00000135861ENSDARG00000092443ENSDART00000141773CIL_0001IU_0002ENSG00000008441ENST00000358552ENST00000360105ENST00000397661ENST00000585382ENST00000585575ENST00000586797ENST00000586873ENST00000587260ENST00000587760ENST00000588228ENST00000588680ENST00000590027ENST00000591028ENST00000592199ENSG00000179284ENST00000317060ENST00000585548ENSG00000267417ENST00000586630ENSG00000279044ENST00000625100
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001IU_0001ENSDARG00000036471ENSDART00000052992ENSDARG00000043226ENSDART00000121795ENSDARG00000092443ENSDART00000141773CIL_0001IU_0002ENSG00000008441ENST00000358552ENST00000360105ENST00000397661ENST00000586797ENST00000587260ENST00000587760ENSG00000179284ENST00000317060ENST00000585548ENSG00000267417ENST00000586630ENSG00000279044ENST00000625100
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036471 ENSDART00000052992 N/A N/A 0.828±0.65 N/A N/A 0.449±0.18 0.768±0.00 0.040±0.00 N/A 0.166±0.00 N/A N/A N/A
ENSDARG00000043226 ENSDART00000121795 N/A N/A N/A N/A N/A 2.511±1.79 N/A 1.784±0.00 N/A 1.335±0.00 N/A N/A N/A
ENSDART00000135861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000092443 ENSDART00000141773 N/A N/A 1.435±0.32 N/A N/A 0.463±0.04 0.243±0.00 N/A N/A 0.118±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000008441 ENST00000358552 N/A N/A 1.560±0.00 N/A N/A 0.776±0.00 N/A N/A N/A N/A 1.983±0.94 N/A N/A
ENST00000360105 10.016±0.00 10.640±0.00 13.926±0.00 10.790±9.30 6.667±6.24 0.362±0.00 N/A 4.028±0.00 N/A 58.161±0.00 18.496±6.47 4.945±3.73 9.827±3.98
ENST00000397661 N/A N/A 0.852±0.00 N/A N/A N/A N/A N/A N/A N/A 16.123±12.97 2.153±0.34 3.847±0.00
ENST00000585382 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000585575 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.869±0.00 N/A N/A
ENST00000586873 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000587260 N/A N/A 2.959±0.00 N/A N/A N/A N/A N/A N/A 9.655±0.00 N/A N/A N/A
ENST00000587760 N/A N/A 3.267±0.00 3.090±0.00 2.737±0.00 1.813±0.00 N/A N/A 2.347±0.00 N/A N/A N/A N/A
ENST00000588228 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588680 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590027 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591028 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592199 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000179284 ENST00000317060 N/A N/A N/A 0.143±0.00 0.979±0.00 1.299±0.95 0.473±0.00 N/A 0.132±0.00 N/A 0.120±0.00 N/A 0.468±0.00
ENST00000585548 0.181±0.00 0.498±0.00 0.199±0.17 0.247±0.21 0.108±0.00 0.955±0.00 N/A 0.053±0.00 0.119±0.03 0.113±0.00 0.138±0.08 0.090±0.06 0.219±0.00
ENSG00000267417 ENST00000586630 N/A 0.124±0.00 0.199±0.00 0.342±0.00 N/A N/A N/A N/A N/A 0.113±0.00 N/A N/A 0.364±0.00
ENSG00000279044 ENST00000625100 0.126±0.00 0.163±0.00 0.153±0.00 0.675±0.64 0.062±0.00 N/A N/A 0.187±0.13 0.331±0.00 0.589±0.00 0.182±0.06 N/A 0.182±0.15

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