C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear factor I/Xa
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000135861 nfixa-001 ENSDARG00000043226 7955 + 1:52397365-52455684 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001IU CIL_0001IU_0001 CGP 1:52320998-52595159

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006260 IEA DNA replication
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007519 IMP skeletal muscle tissue development
GO:0048741 IMP skeletal muscle fiber development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020461 Nfic-002 protein_coding Mus_musculus 0 536
ENSMUST00000076715 Nfix-003 protein_coding Mus_musculus 0 531
ENSMUST00000078185 Nfic-005 protein_coding Mus_musculus 0 536
ENSMUST00000099070 Nfix-002 protein_coding Mus_musculus 0 531
ENSMUST00000105321 Nfic-001 protein_coding Mus_musculus 0 536
ENSMUST00000109762 Nfix-004 protein_coding Mus_musculus 0 503
ENSMUST00000109764 Nfix-001 protein_coding Mus_musculus 0 503
ENSMUST00000117966 Nfic-004 protein_coding Mus_musculus 0 521
ENSMUST00000126806 Nfix-005 protein_coding Mus_musculus 0 529
ENST00000358552 NFIX-201 protein_coding Homo_sapiens 0 529
ENST00000360105 NFIX-003 protein_coding Homo_sapiens 0 529
ENST00000397661 NFIX-001 protein_coding Homo_sapiens 0 564
ENST00000585382 NFIX-009 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000585575 NFIX-006 protein_coding Homo_sapiens 0 531
ENST00000586797 NFIX-005 nonsense_mediated_decay Homo_sapiens 0 529
ENST00000586873 NFIX-011 protein_coding Homo_sapiens 0 508
ENST00000587260 NFIX-007 protein_coding Homo_sapiens 0 534
ENST00000587760 NFIX-002 protein_coding Homo_sapiens 0 531
ENST00000588228 NFIX-004 protein_coding Homo_sapiens 0 529
ENST00000590027 NFIX-008 protein_coding Homo_sapiens 0 514
ENST00000591028 NFIX-010 protein_coding Homo_sapiens 0 501
ENST00000592199 NFIX-013 protein_coding Homo_sapiens 0 556

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