C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LY6/PLAUR domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397463 LYPD1-001 ENSG00000150551 9606 - 2:132644853-132670205 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000397463
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000397463 0.466±0.00 0.926±0.00 3.770±0.85 0.359±0.14 2.659±2.23 0.014±0.00 2.097±1.63 1.248±0.83 1.038±0.73 7.202±6.07 0.260±0.00 5.772±1.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001J2 CIL_0001J2_0001 CGP 2:132416574-132671579
CIL_0001W8 CIL_0001W8_0001 CGP 2:132644853-133568463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0031225 IEA anchored component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000159417 Lypd1-001 protein_coding Mus_musculus 0 1107
ENSMUST00000162899 Lypd1-003 protein_coding Mus_musculus 0 774
ENSMUST00000027582 Lypd1-002 protein_coding Mus_musculus 0 754
ENSMUST00000027581 Gpr39-001 protein_coding Mus_musculus 0 542
ENSMUST00000159529 Lypd1-004 protein_coding Mus_musculus 0 512
ENSMUST00000161361 Lypd1-005 protein_coding Mus_musculus 0 265

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