C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001JO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000090797-ENSDARG00000061941 CGP 7955 5:21495339-21616638
GeneTranscriptPositionBiotype
ENSDARG00000061941 (trpv4)
transient receptor potential cation channel, subfamily V, member 4 		ENSDART00000138186 (trpv4-001) 21579305-21616638 protein_coding
CIL_0001JO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000139438-ENSG00000111199 CGP 9606 12:109714228-109833401
GeneTranscriptPositionBiotype
ENSG00000111199 (TRPV4)
transient receptor potential cation channel, subfamily V, member 4 		ENST00000261740 (TRPV4-001) 109783087-109833401 protein_coding
ENST00000418703 (TRPV4-006) 109783085-109814891 protein_coding
ENST00000536570 (TRPV4-008) 109814701-109832735 processed_transcript
ENST00000536838 (TRPV4-005) 109783621-109814796 protein_coding
ENST00000537083 (TRPV4-003) 109783621-109814796 protein_coding
ENST00000538125 (TRPV4-007) 109783558-109833401 nonsense_mediated_decay
ENST00000541794 (TRPV4-004) 109783621-109814796 protein_coding
ENST00000544971 (TRPV4-002) 109783621-109814796 protein_coding
ENSG00000139438 (FAM222A)
family with sequence similarity 222, member A 		ENST00000358906 (FAM222A-002) 109734767-109770494 protein_coding
ENST00000538780 (FAM222A-001) 109714228-109770507 protein_coding
ENST00000543653 (FAM222A-003) 109714735-109722825 processed_transcript
ENSG00000255650 (FAM222A-AS1)
FAM222A antisense RNA 1 		ENST00000536474 (FAM222A-AS1-004) 109734412-109735957 antisense
ENST00000541460 (FAM222A-AS1-002) 109734323-109773484 antisense
ENST00000541723 (FAM222A-AS1-001) 109734166-109773508 antisense
CIL_0001JO_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000041930-ENSMUSG00000014158 CGP 10090 5:114568016-114658421
GeneTranscriptPositionBiotype
ENSMUSG00000014158 (Trpv4)
transient receptor potential cation channel, subfamily V, member 4 		ENSMUST00000071968 (Trpv4-001) 114622152-114658421 protein_coding
ENSMUST00000112217 (Trpv4-007) 114622653-114644899 protein_coding
ENSMUST00000112219 (Trpv4-006) 114622653-114644899 protein_coding
ENSMUST00000112222 (Trpv4-005) 114622653-114644899 protein_coding
ENSMUST00000112225 (Trpv4-002) 114622154-114658418 protein_coding
ENSMUST00000133019 (Trpv4-004) 114622157-114636261 retained_intron
ENSMUST00000141828 (Trpv4-003) 114626744-114630638 processed_transcript
ENSMUSG00000041930 (Fam222a)
family with sequence similarity 222, member A 		ENSMUST00000043650 (Fam222a-001) 114568016-114613220 protein_coding
ENSMUST00000130983 (Fam222a-002) 114568017-114594678 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JO_0001ENSDARG00000061941ENSDART00000138186CIL_0001JO_0002ENSG00000111199ENST00000261740ENST00000418703ENST00000536570ENST00000536838ENST00000537083ENST00000538125ENST00000541794ENST00000544971ENSG00000139438ENST00000358906ENST00000538780ENST00000543653ENSG00000255650ENST00000536474ENST00000541460ENST00000541723CIL_0001JO_0003ENSMUSG00000014158ENSMUST00000071968ENSMUST00000112217ENSMUST00000112219ENSMUST00000112222ENSMUST00000112225ENSMUST00000133019ENSMUST00000141828ENSMUSG00000041930ENSMUST00000043650ENSMUST00000130983
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001JO_0001ENSDARG00000061941ENSDART00000138186CIL_0001JO_0002ENSG00000111199ENST00000261740ENST00000418703ENST00000536570ENST00000536838ENST00000537083ENST00000538125ENST00000541794ENST00000544971ENSG00000139438ENST00000358906ENST00000538780ENST00000543653ENSG00000255650ENST00000536474ENST00000541460ENST00000541723CIL_0001JO_0003ENSMUSG00000014158ENSMUST00000071968ENSMUST00000112217ENSMUST00000112219ENSMUST00000112222ENSMUST00000112225ENSMUST00000133019ENSMUST00000141828ENSMUSG00000041930ENSMUST00000043650ENSMUST00000130983
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000061941 ENSDART00000138186 N/A N/A N/A 0.292±0.01 N/A N/A 6.852±4.43 0.647±0.59 N/A N/A 1.876±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000111199 ENST00000261740 0.178±0.00 N/A N/A 0.082±0.00 N/A 0.042±0.00 0.093±0.00 3.392±0.00 0.382±0.00 N/A N/A 0.579±0.14 3.630±1.86 N/A
ENST00000418703 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.148±0.00 N/A N/A N/A N/A
ENST00000536570 N/A N/A N/A N/A 0.230±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000536838 N/A N/A N/A N/A N/A N/A 0.115±0.00 N/A N/A N/A N/A 0.298±0.04 1.790±0.98 N/A
ENST00000537083 N/A N/A N/A 0.160±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000538125 N/A N/A 0.394±0.00 N/A 0.212±0.00 N/A N/A 0.211±0.00 N/A N/A N/A N/A N/A N/A
ENST00000541794 N/A N/A 3.030±0.00 0.147±0.00 N/A N/A N/A 0.463±0.00 N/A N/A N/A N/A 1.926±0.00 N/A
ENST00000544971 N/A N/A N/A 0.077±0.00 N/A 0.076±0.00 N/A N/A 0.133±0.00 N/A N/A N/A N/A 0.422±0.00
ENSG00000139438 ENST00000358906 N/A 0.367±0.00 0.213±0.00 1.795±0.00 0.437±0.33 0.328±0.03 0.228±0.00 N/A 0.183±0.00 0.013±0.00 0.527±0.05 1.720±1.13 N/A 2.554±0.00
ENST00000538780 0.388±0.00 0.148±0.00 N/A 5.077±4.54 0.255±0.10 0.793±0.00 2.595±2.49 4.990±4.63 1.020±0.00 2.017±0.00 1.842±0.00 2.796±3.09 0.371±0.11 5.633±1.83
ENST00000543653 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.208±0.00 N/A
ENSG00000255650 ENST00000536474 0.095±0.00 N/A N/A N/A 0.366±0.00 N/A 0.184±0.00 N/A N/A N/A N/A 0.413±0.20 0.093±0.00 2.141±1.87
ENST00000541460 N/A N/A N/A 0.393±0.00 N/A 0.049±0.00 N/A N/A 0.192±0.00 N/A N/A 0.321±0.00 N/A 0.263±0.00
ENST00000541723 0.064±0.00 0.179±0.00 N/A 0.352±0.00 0.941±0.00 N/A 0.107±0.00 0.563±0.09 N/A 0.336±0.00 N/A 0.417±0.11 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000014158 ENSMUST00000071968 3.735±0.79 0.894±0.32 14.621±1.55 0.187±0.02 4.240±1.67 0.974±0.27 1.142±0.41 32.430±5.52 0.098±0.06 1.680±0.64 0.225±0.05 2.222±0.31 0.183±0.01 N/A
ENSMUST00000112217 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.438±0.00 0.471±0.00 N/A 0.154±0.00
ENSMUST00000112219 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.395±0.07 N/A
ENSMUST00000112222 N/A N/A N/A 0.361±0.00 1.247±0.00 N/A 0.618±0.00 N/A N/A N/A N/A 0.888±0.21 N/A 0.051±0.00
ENSMUST00000112225 1.741±0.76 0.902±0.28 9.358±1.77 0.142±0.03 1.542±0.44 N/A 0.563±0.00 18.626±2.16 0.057±0.02 1.165±0.36 0.201±0.03 2.818±1.16 0.382±0.20 0.195±0.05
ENSMUST00000133019 0.969±0.10 0.414±0.11 4.253±0.37 0.173±0.01 1.010±0.16 0.377±0.20 N/A N/A 0.103±0.06 0.621±0.14 0.111±0.00 0.811±0.38 0.115±0.03 0.145±0.01
ENSMUST00000141828 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.356±0.00 N/A 0.130±0.00 N/A
ENSMUSG00000041930 ENSMUST00000043650 0.776±0.29 18.073±0.98 0.105±0.02 2.555±0.69 0.881±0.38 3.116±0.29 0.760±0.18 1.696±0.18 0.525±0.12 2.400±0.08 0.127±0.06 13.422±4.93 0.450±0.22 4.297±2.22
ENSMUST00000130983 N/A N/A N/A 1.306±0.00 0.142±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.956±0.00

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