C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001K9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000032219-ENSG00000196860 CGP 9606 14:58298385-58408701
GeneTranscriptPositionBiotype
ENSG00000032219 (ARID4A)
AT rich interactive domain 4A (RBP1-like) 		ENST00000348476 (ARID4A-201) 58298504-58373730 protein_coding
ENST00000355431 (ARID4A-001) 58298385-58373733 protein_coding
ENST00000395168 (ARID4A-003) 58298556-58372226 protein_coding
ENST00000417477 (ARID4A-009) 58331287-58365300 protein_coding
ENST00000424658 (ARID4A-006) 58299331-58304990 protein_coding
ENST00000431317 (ARID4A-002) 58299537-58373887 protein_coding
ENST00000431612 (ARID4A-004) 58298559-58306112 nonsense_mediated_decay
ENST00000445108 (ARID4A-005) 58298588-58330169 protein_coding
ENST00000466065 (ARID4A-008) 58365475-58371960 retained_intron
ENST00000469635 (ARID4A-007) 58353454-58360991 retained_intron
ENST00000553355 (ARID4A-010) 58351297-58359172 processed_transcript
ENSG00000100575 (TIMM9)
translocase of inner mitochondrial membrane 9 homolog (yeast) 		ENST00000216463 (TIMM9-008) 58408603-58427527 processed_transcript
ENST00000395159 (TIMM9-001) 58408494-58427614 protein_coding
ENST00000555061 (TIMM9-004) 58408874-58412113 protein_coding
ENST00000555097 (TIMM9-012) 58410845-58427161 protein_coding
ENST00000555404 (TIMM9-003) 58409034-58427187 protein_coding
ENST00000555593 (TIMM9-002) 58408648-58427505 protein_coding
ENST00000555930 (TIMM9-010) 58408979-58427146 processed_transcript
ENST00000556007 (TIMM9-009) 58408664-58427114 protein_coding
ENST00000556367 (TIMM9-011) 58408880-58427174 processed_transcript
ENST00000557397 (TIMM9-005) 58408812-58427171 processed_transcript
ENSG00000258658 (RP11-517O13.3)
 ENST00000556390 (RP11-517O13.3-001) 58370023-58395641 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0001K9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048118-ENSMUSG00000021078 CGP 10090 12:71015990-71123222
GeneTranscriptPositionBiotype
ENSMUSG00000021078 (Tomm20l)
translocase of outer mitochondrial membrane 20 homolog (yeast)-like 		ENSMUST00000021482 (Tomm20l-201) 71111428-71123222 protein_coding
ENSMUSG00000021079 (Timm9)
translocase of inner mitochondrial membrane 9 		ENSMUST00000021486 (Timm9-201) 71123173-71136675 protein_coding
ENSMUST00000166120 (Timm9-202) 71123173-71136675 protein_coding
ENSMUSG00000048118 (Arid4a)
AT rich interactive domain 4A (RBP1-like) 		ENSMUST00000046305 (Arid4a-001) 71015990-71098592 protein_coding
ENSMUST00000125125 (Arid4a-003) 71016708-71047339 protein_coding
ENSMUST00000134718 (Arid4a-002) 71016029-71067261 processed_transcript
ENSMUST00000135709 (Arid4a-004) 71048341-71075405 protein_coding

Mus musculus Ensembl (GRCm38)

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Genes
Structures from Ensembl
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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001K9_0001ENSG00000032219ENST00000348476ENST00000355431ENST00000395168ENST00000417477ENST00000424658ENST00000431317ENST00000431612ENST00000445108ENST00000466065ENST00000469635ENST00000553355ENSG00000100575ENST00000216463ENST00000395159ENST00000555061ENST00000555097ENST00000555404ENST00000555593ENST00000555930ENST00000556007ENST00000556367ENST00000557397ENSG00000258658ENST00000556390CIL_0001K9_0002ENSMUSG00000021078ENSMUST00000021482ENSMUSG00000021079ENSMUST00000021486ENSMUST00000166120ENSMUSG00000048118ENSMUST00000046305ENSMUST00000125125ENSMUST00000134718ENSMUST00000135709
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001K9_0001ENSG00000032219ENST00000348476ENST00000355431ENST00000395168ENST00000417477ENST00000431317ENST00000445108ENSG00000100575ENST00000216463ENST00000395159ENST00000555061ENST00000555404ENST00000555593ENST00000555930ENST00000556007ENST00000556367ENST00000557397ENSG00000258658ENST00000556390CIL_0001K9_0002ENSMUSG00000021078ENSMUST00000021482ENSMUSG00000021079ENSMUST00000021486ENSMUST00000166120ENSMUSG00000048118ENSMUST00000046305ENSMUST00000125125ENSMUST00000135709
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000032219 ENST00000348476 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.172±0.00 N/A N/A N/A
ENST00000355431 1.872±0.00 2.450±0.00 N/A 2.018±1.28 N/A 2.186±0.09 0.798±0.67 2.081±0.06 1.682±1.06 1.106±0.08 0.305±0.06 2.301±0.37 0.846±0.52 2.495±0.60
ENST00000395168 1.639±0.00 1.495±0.00 N/A 1.417±0.00 1.441±0.00 0.993±0.00 0.924±0.00 0.681±0.00 N/A N/A 0.475±0.00 3.205±0.00 1.799±1.41 1.700±0.90
ENST00000417477 N/A N/A N/A 1.402±0.00 N/A N/A N/A N/A N/A N/A N/A 7.019±0.00 6.902±0.00 8.553±0.00
ENST00000424658 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431317 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.397±0.00 N/A N/A
ENST00000431612 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000445108 N/A N/A N/A N/A N/A N/A N/A 3.626±0.00 N/A 2.809±0.00 N/A N/A N/A N/A
ENST00000466065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000553355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000100575 ENST00000216463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.047±0.00 N/A
ENST00000395159 N/A N/A N/A N/A N/A N/A 1.185±0.00 N/A N/A N/A N/A 10.300±0.00 N/A N/A
ENST00000555061 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.769±0.00 N/A N/A N/A
ENST00000555097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000555404 N/A N/A N/A N/A N/A N/A N/A 4.436±0.00 N/A N/A N/A N/A N/A N/A
ENST00000555593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.125±0.00 5.417±0.00 N/A
ENST00000555930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.109±0.00 N/A N/A N/A
ENST00000556007 10.272±0.00 13.048±0.00 N/A 5.724±0.00 9.578±0.00 12.350±0.00 3.965±0.00 10.137±0.00 4.904±0.00 5.392±0.00 8.125±0.00 12.827±0.00 6.691±2.29 N/A
ENST00000556367 N/A N/A 3.373±0.00 6.150±0.00 N/A N/A N/A N/A N/A 7.569±0.00 N/A 12.935±0.00 5.088±0.00 N/A
ENST00000557397 15.492±0.00 20.899±0.00 N/A 9.990±0.00 12.652±0.00 19.980±0.00 5.426±0.00 16.592±0.00 8.924±0.00 12.634±0.00 13.448±0.00 N/A 5.614±0.00 23.527±0.00
ENSG00000258658 ENST00000556390 N/A 0.070±0.00 N/A 0.108±0.00 N/A 0.065±0.00 N/A N/A N/A N/A N/A 0.378±0.28 0.155±0.00 0.695±0.44
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021078 ENSMUST00000021482 N/A 9.463±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 32.463±9.22
ENSMUSG00000021079 ENSMUST00000021486 2.364±0.63 3.320±0.81 3.471±0.00 6.113±1.02 1.048±0.27 1.476±0.50 1.547±0.54 3.528±0.88 6.586±3.54 1.345±0.77 3.489±0.58 4.991±1.32 7.168±2.03 N/A
ENSMUST00000166120 2.557±0.57 N/A 2.012±0.00 6.287±0.00 1.766±0.37 1.172±0.51 1.345±0.77 1.496±0.35 1.517±0.32 1.035±0.28 3.628±0.85 1.073±0.35 3.698±1.22 3.040±0.08
ENSMUSG00000048118 ENSMUST00000046305 0.948±0.21 1.476±0.32 7.793±1.41 4.308±1.80 2.498±0.57 1.127±0.44 1.054±0.13 1.342±0.16 3.249±2.77 3.302±0.74 1.475±0.31 3.316±3.18 3.373±1.71 2.050±1.44
ENSMUST00000125125 1.619±0.00 1.404±0.41 N/A N/A 1.841±0.00 0.862±0.00 N/A N/A N/A N/A N/A 0.902±0.15 N/A N/A
ENSMUST00000134718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135709 N/A N/A N/A 29.986±0.00 N/A N/A N/A N/A N/A N/A N/A 23.804±0.00 8.514±1.15 42.102±0.00

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