C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001LC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000102032-ENSG00000172534 CGP 9606 X:153935263-153971807
GeneTranscriptPositionBiotype
ENSG00000102032 (RENBP)
renin binding protein 		ENST00000369997 (RENBP-004) 153935283-153944687 protein_coding
ENST00000393700 (RENBP-001) 153935263-153944691 protein_coding
ENST00000423624 (RENBP-009) 153935286-153944626 nonsense_mediated_decay
ENST00000442361 (RENBP-005) 153935999-153943943 nonsense_mediated_decay
ENST00000451114 (RENBP-003) 153935333-153940215 protein_coding
ENST00000457282 (RENBP-002) 153935275-153941969 nonsense_mediated_decay
ENST00000462086 (RENBP-007) 153942245-153943632 processed_transcript
ENST00000464227 (RENBP-006) 153943058-153944232 retained_intron
ENST00000471056 (RENBP-008) 153943535-153944611 retained_intron
ENST00000475904 (RENBP-010) 153943614-153944643 retained_intron
ENSG00000172534 (HCFC1)
host cell factor C1 		ENST00000310441 (HCFC1-001) 153947553-153971807 protein_coding
ENST00000369984 (HCFC1-003) 153947559-153971184 protein_coding
ENST00000444191 (HCFC1-004) 153947557-153954121 protein_coding
ENST00000461098 (HCFC1-002) 153960009-153962267 processed_transcript
ENSG00000235802 (HCFC1-AS1)
HCFC1 antisense RNA 1 		ENST00000438219 (HCFC1-AS1-001) 153969325-153970087 antisense
CIL_0001LC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031387-ENSMUSG00000031386 CGP 10090 X:73922121-73966357
GeneTranscriptPositionBiotype
ENSMUSG00000031386 (Hcfc1)
host cell factor C1 		ENSMUST00000033761 (Hcfc1-001) 73942792-73966357 protein_coding
ENSMUST00000114372 (Hcfc1-005) 73942797-73966351 protein_coding
ENSMUST00000128136 (Hcfc1-002) 73942795-73949253 protein_coding
ENSMUST00000128325 (Hcfc1-008) 73955121-73957429 processed_transcript
ENSMUST00000131091 (Hcfc1-006) 73947195-73948346 processed_transcript
ENSMUST00000156204 (Hcfc1-007) 73945321-73947432 retained_intron
ENSMUSG00000031387 (Renbp)
renin binding protein 		ENSMUST00000114379 (Renbp-002) 73922121-73930792 protein_coding
ENSMUST00000116578 (Renbp-001) 73922121-73930850 protein_coding
ENSMUST00000135213 (Renbp-007) 73922122-73926401 retained_intron
ENSMUST00000135711 (Renbp-003) 73922123-73930817 retained_intron
ENSMUST00000144771 (Renbp-008) 73925263-73929129 processed_transcript
ENSMUST00000146371 (Renbp-004) 73928239-73930741 retained_intron
ENSMUST00000149130 (Renbp-006) 73926267-73928080 retained_intron
ENSMUST00000150241 (Renbp-005) 73929589-73930752 retained_intron
ENSMUST00000155597 (Renbp-009) 73922139-73930756 protein_coding
ENSMUST00000165359 (Renbp-010) 73929142-73930745 nonsense_mediated_decay

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LC_0001ENSG00000102032ENST00000369997ENST00000393700ENST00000423624ENST00000442361ENST00000451114ENST00000457282ENST00000462086ENST00000464227ENST00000471056ENST00000475904ENSG00000172534ENST00000310441ENST00000369984ENST00000444191ENST00000461098ENSG00000235802ENST00000438219CIL_0001LC_0002ENSMUSG00000031386ENSMUST00000033761ENSMUST00000114372ENSMUST00000128136ENSMUST00000128325ENSMUST00000131091ENSMUST00000156204ENSMUSG00000031387ENSMUST00000114379ENSMUST00000116578ENSMUST00000135213ENSMUST00000135711ENSMUST00000144771ENSMUST00000146371ENSMUST00000149130ENSMUST00000150241ENSMUST00000155597ENSMUST00000165359
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001LC_0001ENSG00000102032ENST00000369997ENST00000393700ENST00000423624ENST00000457282ENST00000462086ENST00000464227ENST00000471056ENST00000475904ENSG00000172534ENST00000310441ENST00000369984ENST00000444191ENSG00000235802ENST00000438219CIL_0001LC_0002ENSMUSG00000031386ENSMUST00000033761ENSMUST00000114372ENSMUST00000128136ENSMUSG00000031387ENSMUST00000114379ENSMUST00000116578ENSMUST00000135213ENSMUST00000135711ENSMUST00000144771ENSMUST00000146371ENSMUST00000149130ENSMUST00000150241ENSMUST00000155597ENSMUST00000165359
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000102032 ENST00000369997 N/A 11.840±0.00 N/A 1.300±0.42 N/A N/A N/A N/A N/A 1.814±0.00 0.226±0.00 0.644±0.00 N/A N/A
ENST00000393700 10.712±0.00 16.464±0.00 N/A 3.570±0.00 7.364±0.00 4.664±0.00 2.333±0.00 11.915±0.00 1.899±0.00 N/A 0.396±0.00 5.404±2.87 6.456±2.01 0.736±0.36
ENST00000423624 3.151±0.00 N/A 2.682±0.00 4.850±0.00 4.231±3.45 1.794±1.49 1.655±0.00 9.156±8.79 3.734±0.00 4.664±3.46 0.537±0.00 2.200±0.00 8.513±0.53 2.610±0.00
ENST00000442361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000457282 N/A N/A N/A N/A N/A N/A 0.227±0.00 N/A 0.301±0.00 N/A N/A N/A N/A N/A
ENST00000462086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.649±0.00 N/A 0.262±0.00
ENST00000464227 N/A N/A 8.869±0.00 N/A 1.659±0.00 N/A 0.971±0.00 1.911±0.00 2.440±0.00 N/A N/A N/A 7.667±0.00 N/A
ENST00000471056 6.519±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.366±0.00
ENST00000475904 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.332±0.00 N/A N/A 0.413±0.00
ENSG00000172534 ENST00000310441 8.678±0.00 3.436±0.00 1.801±0.00 3.915±1.69 2.694±1.21 2.146±0.20 3.103±2.03 2.534±1.59 1.432±0.00 2.713±2.02 4.463±1.27 9.067±8.21 3.658±1.07 5.539±0.00
ENST00000369984 1.758±0.00 2.507±0.00 N/A 1.245±0.00 0.378±0.00 2.474±0.00 N/A N/A 0.979±0.00 0.921±0.00 N/A N/A N/A 2.363±1.28
ENST00000444191 6.363±0.00 12.425±0.00 N/A 3.639±0.00 7.168±0.00 7.291±0.00 3.222±0.00 9.553±0.00 5.527±0.00 6.256±0.00 5.113±0.00 11.450±1.34 4.300±0.57 7.873±2.84
ENST00000461098 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000235802 ENST00000438219 0.244±0.00 0.527±0.00 N/A 0.646±0.00 N/A 0.176±0.00 N/A 0.201±0.00 N/A N/A 0.257±0.00 N/A N/A 0.252±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031386 ENSMUST00000033761 9.593±5.12 22.763±5.49 2.196±0.93 8.867±3.18 10.758±5.75 15.172±1.76 4.692±0.70 7.380±1.49 6.508±4.58 13.592±2.11 3.890±1.30 15.598±4.41 9.382±6.93 2.533±0.25
ENSMUST00000114372 3.380±2.28 4.485±1.03 N/A 4.561±1.58 3.225±0.56 3.309±0.68 2.025±0.34 2.334±0.89 2.722±1.08 3.774±0.00 1.581±0.48 4.063±1.33 5.994±2.14 0.782±0.31
ENSMUST00000128136 4.392±1.17 N/A 4.587±1.35 4.364±1.71 N/A N/A N/A 3.387±0.42 5.568±2.21 N/A 1.821±0.00 3.872±0.00 3.837±0.61 N/A
ENSMUST00000128325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131091 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000031387 ENSMUST00000114379 2.085±0.80 0.800±0.36 2.985±0.88 0.752±0.28 1.534±0.25 1.110±0.47 0.289±0.00 16.992±2.62 1.311±0.58 4.408±0.45 0.251±0.11 4.475±1.77 15.136±4.29 0.393±0.22
ENSMUST00000116578 6.290±1.94 0.939±0.23 10.363±1.01 2.079±0.25 3.705±1.15 1.234±0.68 1.290±0.30 37.022±6.90 4.093±3.27 12.156±1.91 0.520±0.11 8.110±3.14 30.242±24.52 0.704±0.20
ENSMUST00000135213 N/A 1.034±0.00 N/A N/A N/A N/A N/A N/A 0.842±0.00 N/A N/A N/A N/A N/A
ENSMUST00000135711 1.580±0.73 0.429±0.18 1.319±0.00 0.158±0.00 0.836±0.24 0.271±0.01 0.194±0.02 N/A 0.104±0.03 1.474±0.00 0.138±0.00 2.031±0.61 3.550±0.00 0.201±0.02
ENSMUST00000144771 N/A N/A N/A N/A N/A N/A N/A N/A 0.385±0.00 N/A 0.605±0.00 N/A N/A N/A
ENSMUST00000146371 N/A N/A N/A N/A N/A N/A 0.259±0.00 N/A N/A N/A 0.165±0.00 N/A N/A N/A
ENSMUST00000149130 N/A N/A N/A N/A N/A N/A N/A N/A 0.930±0.00 N/A 0.273±0.00 N/A N/A N/A
ENSMUST00000150241 N/A N/A N/A 1.722±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 26.911±6.25 0.915±0.00
ENSMUST00000155597 N/A 1.583±0.72 N/A N/A 1.884±0.18 1.622±0.33 0.321±0.00 10.072±2.74 0.272±0.00 4.312±0.18 0.525±0.00 5.976±2.22 14.606±2.04 0.237±0.02
ENSMUST00000165359 N/A 0.817±0.00 N/A 1.862±0.00 N/A N/A N/A N/A N/A N/A 0.491±0.14 N/A N/A N/A

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