C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: host cell factor C1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000114372 Hcfc1-005 ENSMUSG00000031386 10090 - X:73942797-73966351 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000114372
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000114372 3.380±2.28 4.485±1.03 4.561±1.58 3.225±0.56 3.309±0.68 2.025±0.34 2.334±0.89 2.722±1.08 3.774±0.00 1.581±0.48 4.063±1.33 5.994±2.14 0.782±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001LC CIL_0001LC_0002 CGP X:73922121-73966357
CIL_0007F4 CIL_0007F4_0002 CGP X:73942792-74023918

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001205 IDA RNA polymerase II distal enhancer sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310441 HCFC1-001 protein_coding Homo_sapiens 0 4543
ENST00000369984 HCFC1-003 protein_coding Homo_sapiens 0 4527
ENST00000444191 HCFC1-004 protein_coding Homo_sapiens 0 2013
ENST00000461098 HCFC1-002 processed_transcript Homo_sapiens 0 429

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