C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001V7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107938-ENSG00000154485 CGP 9606 10:125719515-125775821
GeneTranscriptPositionBiotype
ENSG00000107938 (EDRF1)
erythroid differentiation regulatory factor 1 		ENST00000337623 (EDRF1-001) 125719703-125764139 protein_coding
ENST00000356792 (EDRF1-007) 125719576-125763651 protein_coding
ENST00000368812 (EDRF1-004) 125749297-125764143 retained_intron
ENST00000368813 (EDRF1-002) 125735887-125741665 protein_coding
ENST00000368815 (EDRF1-008) 125719576-125763651 nonsense_mediated_decay
ENST00000419769 (EDRF1-006) 125719515-125763579 nonsense_mediated_decay
ENST00000469725 (EDRF1-005) 125746701-125749441 retained_intron
ENST00000481600 (EDRF1-003) 125719515-125764143 nonsense_mediated_decay
ENST00000525091 (EDRF1-009) 125719702-125749096 retained_intron
ENST00000525358 (EDRF1-013) 125753779-125763582 nonsense_mediated_decay
ENST00000525524 (EDRF1-011) 125747953-125749813 retained_intron
ENST00000527655 (EDRF1-012) 125749273-125763706 retained_intron
ENST00000530795 (EDRF1-010) 125725766-125735749 nonsense_mediated_decay
ENSG00000154485 (MMP21)
matrix metallopeptidase 21 		ENST00000368808 (MMP21-001) 125766453-125775821 protein_coding
CIL_0001V7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000039990-ENSMUSG00000030981 CGP 10090 7:133637543-133680061
GeneTranscriptPositionBiotype
ENSMUSG00000030981 (Mmp21)
matrix metallopeptidase 21 		ENSMUST00000033278 (Mmp21-001) 133674270-133680061 protein_coding
ENSMUST00000122136 (Mmp21-002) 133674356-133680061 protein_coding
ENSMUST00000131894 (Mmp21-003) 133674270-133680061 retained_intron
ENSMUSG00000039990 (Edrf1)
erythroid differentiation regulatory factor 1 		ENSMUST00000051169 (Edrf1-001) 133637543-133672971 protein_coding
ENSMUST00000128901 (Edrf1-003) 133637693-133672179 protein_coding
ENSMUST00000137338 (Edrf1-005) 133667206-133671470 retained_intron
ENSMUST00000138370 (Edrf1-002) 133657105-133661881 nonsense_mediated_decay
ENSMUST00000154795 (Edrf1-004) 133637861-133639349 retained_intron
ENSMUST00000176661 (Edrf1-006) 133665926-133671929 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001V7_0001ENSG00000107938ENST00000337623ENST00000356792ENST00000368812ENST00000368813ENST00000368815ENST00000419769ENST00000469725ENST00000481600ENST00000525091ENST00000525358ENST00000525524ENST00000527655ENST00000530795ENSG00000154485ENST00000368808CIL_0001V7_0002ENSMUSG00000030981ENSMUST00000033278ENSMUST00000122136ENSMUST00000131894ENSMUSG00000039990ENSMUST00000051169ENSMUST00000128901ENSMUST00000137338ENSMUST00000138370ENSMUST00000154795ENSMUST00000176661
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001V7_0001ENSG00000107938ENST00000337623ENST00000356792ENST00000368812ENST00000368813ENST00000419769ENST00000481600ENST00000525091ENSG00000154485ENST00000368808CIL_0001V7_0002ENSMUSG00000030981ENSMUST00000033278ENSMUST00000122136ENSMUST00000131894ENSMUSG00000039990ENSMUST00000051169ENSMUST00000128901ENSMUST00000176661
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107938 ENST00000337623 0.810±0.00 1.250±0.00 N/A 1.094±0.46 1.271±0.14 1.452±0.25 0.869±0.56 1.575±0.00 0.349±0.00 0.734±0.49 2.612±0.00 1.596±0.69 0.691±0.15 6.254±0.45
ENST00000356792 0.449±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.737±0.34 N/A 3.070±0.00 0.371±0.14 N/A
ENST00000368812 N/A 2.410±0.00 N/A 2.448±0.00 2.179±0.00 1.339±0.00 0.686±0.00 2.138±1.19 0.780±0.00 0.716±0.00 N/A 4.365±1.45 0.875±0.23 10.736±0.00
ENST00000368813 N/A 2.778±0.00 N/A N/A N/A N/A N/A N/A 3.308±0.00 N/A 1.509±0.00 N/A N/A N/A
ENST00000368815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.315±0.00 3.469±0.00
ENST00000469725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481600 N/A N/A N/A N/A N/A N/A N/A N/A 1.551±0.00 N/A N/A N/A N/A N/A
ENST00000525091 N/A 0.669±0.00 0.674±0.00 0.621±0.00 0.878±0.16 N/A N/A N/A N/A 0.661±0.34 0.601±0.00 0.771±0.19 0.250±0.00 N/A
ENST00000525358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000154485 ENST00000368808 0.044±0.00 0.009±0.00 N/A 0.057±0.00 0.026±0.00 0.033±0.00 0.025±0.00 0.093±0.00 0.008±0.00 N/A N/A 0.201±0.17 0.033±0.00 0.137±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030981 ENSMUST00000033278 N/A N/A 0.004±0.00 0.001±0.00 N/A 0.032±0.00 N/A N/A 0.020±0.00 N/A N/A N/A 0.038±0.00 N/A
ENSMUST00000122136 0.028±0.01 0.089±0.01 N/A 0.051±0.00 N/A 0.111±0.00 0.042±0.01 0.017±0.00 0.006±0.00 0.025±0.00 N/A 0.041±0.02 0.027±0.00 0.014±0.00
ENSMUST00000131894 0.022±0.00 N/A 0.012±0.00 0.043±0.04 N/A N/A N/A 0.016±0.01 0.027±0.02 0.018±0.00 N/A 0.036±0.02 0.054±0.03 0.020±0.00
ENSMUSG00000039990 ENSMUST00000051169 1.006±0.31 0.730±0.01 1.617±0.22 2.211±0.18 1.137±0.05 0.998±0.04 0.402±0.10 1.174±0.21 1.121±0.59 0.970±0.00 0.378±0.12 1.205±0.64 1.798±0.26 1.751±0.81
ENSMUST00000128901 1.434±0.60 1.671±0.64 3.316±0.79 4.268±0.59 1.854±0.53 1.376±0.19 1.212±0.18 1.592±0.42 2.338±0.97 1.935±0.28 1.473±0.22 2.757±1.30 4.401±1.06 2.800±1.07
ENSMUST00000137338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176661 N/A 2.345±0.00 N/A N/A N/A 2.311±0.17 N/A N/A N/A N/A N/A 3.655±0.00 N/A N/A

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