C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythroid differentiation regulatory factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525091 EDRF1-009 ENSG00000107938 9606 + 10:125719702-125749096 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastLungMuscleOvaryPlacentaENST00000525091
Transcript ID Adrenal Bladder Brain Breast Lung Muscle Ovary Placenta
ENST00000525091 0.669±0.00 0.674±0.00 0.621±0.00 0.878±0.16 0.661±0.34 0.601±0.00 0.771±0.19 0.250±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JW CIL_0002JW_0002 CGP 10:125576522-125764143
CIL_0001V7 CIL_0001V7_0001 CGP 10:125719515-125775821

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128901 Edrf1-003 protein_coding Mus_musculus 0 3733
ENSMUST00000051169 Edrf1-001 protein_coding Mus_musculus 0 2765
ENSMUST00000154795 Edrf1-004 retained_intron Mus_musculus 0 387
ENSMUST00000138370 Edrf1-002 nonsense_mediated_decay Mus_musculus 0 366

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