C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: erythroid differentiation regulatory factor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000337623 EDRF1-001 ENSG00000107938 9606 + 10:125719703-125764139 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000337623
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000337623 0.810±0.00 1.250±0.00 1.094±0.46 1.271±0.14 1.452±0.25 0.869±0.56 1.575±0.00 0.349±0.00 0.734±0.49 2.612±0.00 1.596±0.69 0.691±0.15 6.254±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002JW CIL_0002JW_0002 CGP 10:125576522-125764143
CIL_0001V7 CIL_0001V7_0001 CGP 10:125719515-125775821

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000128901 Edrf1-003 protein_coding Mus_musculus 0 4253
ENSMUST00000051169 Edrf1-001 protein_coding Mus_musculus 0 3286
ENSMUST00000154795 Edrf1-004 retained_intron Mus_musculus 0 387
ENSMUST00000138370 Edrf1-002 nonsense_mediated_decay Mus_musculus 0 366

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