C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001W7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000074394-ENSDARG00000091784 CGP 7955 19:3386905-3399626
GeneTranscriptPositionBiotype
ENSDARG00000074394 (CABZ01049058.1)
Uncharacterized protein 		ENSDART00000046344 (CABZ01049058.1-201) 3386905-3390635 protein_coding
ENSDARG00000091784 (CABZ01049057.1)
Uncharacterized protein 		ENSDART00000121842 (CABZ01049057.1-201) 3394828-3399626 protein_coding
CIL_0001W7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000076541-ENSDARG00000058943 CGP 7955 16:3444733-3474480
GeneTranscriptPositionBiotype
ENSDARG00000058943 (cdcp1a)
CUB domain containing protein 1a 		ENSDART00000148543 (cdcp1a-001) 3451523-3474480 protein_coding
ENSDARG00000076541 (clec3ba)
C-type lectin domain family 3, member Ba 		ENSDART00000108735 (clec3ba-201) 3444733-3448016 protein_coding
ENSDART00000149485 (clec3ba-001) 3447386-3448153 protein_coding
CIL_0001W7_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163815-ENSG00000163814 CGP 9606 3:45001548-45146422
GeneTranscriptPositionBiotype
ENSG00000075914 (EXOSC7)
exosome component 7 		ENST00000265564 (EXOSC7-001) 44976230-45011470 protein_coding
ENST00000459856 (EXOSC7-010) 45011233-45012668 processed_transcript
ENST00000461361 (EXOSC7-002) 44975241-45012666 processed_transcript
ENST00000467846 (EXOSC7-003) 44976251-45002239 retained_intron
ENST00000468667 (EXOSC7-008) 44976251-45012253 processed_transcript
ENST00000477865 (EXOSC7-007) 44975357-44989242 processed_transcript
ENST00000481405 (EXOSC7-009) 44976276-45036066 processed_transcript
ENST00000482004 (EXOSC7-012) 44975468-45005375 processed_transcript
ENST00000486727 (EXOSC7-004) 45004160-45011470 retained_intron
ENST00000491476 (EXOSC7-005) 44976264-45012633 processed_transcript
ENST00000498168 (EXOSC7-006) 44977092-44989242 processed_transcript
ENSG00000163814 (CDCP1)
CUB domain containing protein 1 		ENST00000296129 (CDCP1-001) 45082278-45146422 protein_coding
ENST00000425231 (CDCP1-002) 45110216-45146422 protein_coding
ENST00000490471 (CDCP1-003) 45112337-45139595 processed_transcript
ENSG00000163815 (CLEC3B)
C-type lectin domain family 3, member B 		ENST00000296130 (CLEC3B-001) 45026183-45036071 protein_coding
ENST00000428034 (CLEC3B-002) 45030130-45036068 protein_coding
ENST00000490386 (CLEC3B-003) 45001548-45036071 processed_transcript
ENSG00000252410 (RNU5B-3P)
RNA, U5B small nuclear 3, pseudogene 		ENST00000516601 (RNU5B-3P-201) 45034474-45034588 snRNA
CIL_0001W7_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000025784-ENSMUSG00000035498 CGP 10090 9:123150946-123216038
GeneTranscriptPositionBiotype
ENSMUSG00000025784 (Clec3b)
C-type lectin domain family 3, member b 		ENSMUST00000026890 (Clec3b-201) 123150946-123157430 protein_coding
ENSMUSG00000035498 (Cdcp1)
CUB domain containing protein 1 		ENSMUST00000039229 (Cdcp1-001) 123170824-123216038 protein_coding
ENSMUST00000140915 (Cdcp1-002) 123180763-123215999 retained_intron
ENSMUST00000148158 (Cdcp1-003) 123173064-123178106 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W7_0001ENSDARG00000074394ENSDART00000046344ENSDARG00000091784ENSDART00000121842CIL_0001W7_0002ENSDARG00000058943ENSDART00000148543ENSDARG00000076541ENSDART00000108735ENSDART00000149485CIL_0001W7_0003ENSG00000075914ENST00000265564ENST00000459856ENST00000461361ENST00000467846ENST00000468667ENST00000477865ENST00000481405ENST00000482004ENST00000486727ENST00000491476ENST00000498168ENSG00000163814ENST00000296129ENST00000425231ENST00000490471ENSG00000163815ENST00000296130ENST00000428034ENST00000490386ENSG00000252410ENST00000516601CIL_0001W7_0004ENSMUSG00000025784ENSMUST00000026890ENSMUSG00000035498ENSMUST00000039229ENSMUST00000140915ENSMUST00000148158
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001W7_0001ENSDARG00000074394ENSDART00000046344ENSDARG00000091784ENSDART00000121842CIL_0001W7_0002ENSDARG00000058943ENSDART00000148543ENSDARG00000076541ENSDART00000108735ENSDART00000149485CIL_0001W7_0003ENSG00000075914ENST00000265564ENST00000467846ENST00000482004ENST00000486727ENST00000491476ENSG00000163814ENST00000296129ENST00000425231ENSG00000163815ENST00000296130ENST00000428034ENST00000490386ENSG00000252410ENST00000516601CIL_0001W7_0004ENSMUSG00000025784ENSMUST00000026890ENSMUSG00000035498ENSMUST00000039229ENSMUST00000140915ENSMUST00000148158
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000074394 ENSDART00000046344 N/A N/A N/A 1.544±0.32 N/A N/A 1.065±0.15 N/A 0.116±0.00 N/A 7.985±0.00 N/A N/A N/A
ENSDARG00000091784 ENSDART00000121842 N/A N/A N/A 0.462±0.17 N/A N/A 0.291±0.20 N/A 0.444±0.00 N/A 0.157±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000058943 ENSDART00000148543 N/A N/A N/A 0.739±0.26 N/A N/A 0.986±0.39 5.607±0.00 0.141±0.00 N/A 0.264±0.00 N/A N/A N/A
ENSDARG00000076541 ENSDART00000108735 N/A N/A N/A 2.532±1.38 N/A N/A 0.444±0.00 0.444±0.00 N/A N/A 0.399±0.00 N/A N/A N/A
ENSDART00000149485 N/A N/A N/A 1.983±2.06 N/A N/A 0.157±0.00 0.382±0.00 N/A N/A 0.587±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075914 ENST00000265564 12.038±0.00 14.214±0.00 N/A 5.162±2.29 N/A 4.561±1.91 6.620±4.94 16.860±0.00 6.699±0.00 9.407±4.23 7.606±4.81 15.411±3.89 14.439±0.00 23.499±2.35
ENST00000459856 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461361 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467846 N/A N/A N/A N/A N/A 1.046±0.00 N/A N/A N/A N/A N/A 1.331±0.00 N/A N/A
ENST00000468667 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481405 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482004 N/A N/A N/A N/A 3.609±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486727 N/A N/A N/A 1.513±0.00 N/A 1.132±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491476 N/A 5.477±0.00 N/A 1.429±0.00 N/A 4.105±0.00 0.711±0.00 N/A 2.576±0.00 N/A 2.165±0.33 5.108±1.53 N/A N/A
ENST00000498168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163814 ENST00000296129 0.331±0.00 0.477±0.00 0.267±0.00 0.190±0.18 0.812±0.00 1.748±0.80 0.097±0.02 1.198±0.97 0.170±0.02 3.353±0.00 0.128±0.01 2.171±1.75 1.962±0.88 0.491±0.00
ENST00000425231 N/A N/A 0.436±0.00 0.030±0.00 N/A 1.902±0.00 0.077±0.00 N/A 0.248±0.00 1.140±0.00 N/A 0.576±0.00 N/A N/A
ENST00000490471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000163815 ENST00000296130 32.532±0.00 33.761±0.00 3.097±0.00 7.501±4.68 147.907±142.87 20.588±12.93 20.729±17.41 15.470±8.12 21.188±3.77 88.684±70.76 7.559±0.00 20.177±20.23 352.273±162.49 101.180±34.81
ENST00000428034 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 39.859±8.34
ENST00000490386 15.811±0.00 24.100±0.00 N/A N/A 100.204±0.00 13.372±0.00 N/A 21.215±0.00 N/A N/A 6.721±0.00 N/A 89.450±0.00 N/A
ENSG00000252410 ENST00000516601 N/A N/A N/A N/A N/A N/A 13.674±0.00 0.839±0.00 N/A N/A N/A 1.444±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025784 ENSMUST00000026890 148.364±54.79 23.517±6.43 276.258±41.64 2.354±1.16 170.329±61.78 56.683±12.22 27.577±2.87 10.142±2.40 0.264±0.18 79.188±9.95 22.505±4.08 39.089±10.10 2.353±4.23 4.789±2.13
ENSMUSG00000035498 ENSMUST00000039229 2.634±1.84 0.049±0.02 6.380±0.46 0.088±0.05 4.387±1.07 15.382±0.66 0.066±0.04 7.238±2.39 1.156±0.90 5.415±0.30 0.023±0.01 2.310±1.08 8.150±5.91 0.147±0.12
ENSMUST00000140915 1.035±0.00 0.066±0.00 N/A N/A 1.972±0.47 4.211±0.74 0.067±0.02 N/A 0.206±0.13 1.358±0.12 0.018±0.00 2.227±0.64 N/A 0.043±0.05
ENSMUST00000148158 N/A 0.071±0.03 N/A N/A N/A N/A N/A N/A N/A N/A 0.030±0.01 N/A N/A N/A

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