C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001X9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000045308-ENSDARG00000058011 CGP 7955 24:24448797-24550670
GeneTranscriptPositionBiotype
ENSDARG00000045308 (pola1)
polymerase (DNA directed), alpha 1 		ENSDART00000127188 (pola1-001) 24448797-24540473 protein_coding
ENSDART00000128595 (pola1-201) 24448900-24540472 protein_coding
ENSDART00000138097 (pola1-002) 24449632-24540473 nonsense_mediated_decay
ENSDARG00000058011 (arxa)
aristaless related homeobox a 		ENSDART00000080810 (arxa-001) 24544777-24550670 protein_coding
CIL_0001X9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000101868-ENSG00000004848 CGP 9606 X:24693919-25015948
GeneTranscriptPositionBiotype
ENSG00000004848 (ARX)
aristaless related homeobox 		ENST00000379044 (ARX-001) 25003694-25015948 protein_coding
ENSG00000101868 (POLA1)
polymerase (DNA directed), alpha 1, catalytic subunit 		ENST00000379059 (POLA1-001) 24693947-24996986 protein_coding
ENST00000379068 (POLA1-005) 24693919-24996986 protein_coding
ENST00000480125 (POLA1-002) 24745503-24810781 processed_transcript
ENST00000493342 (POLA1-003) 24726933-24734353 processed_transcript
ENST00000494204 (POLA1-004) 24812830-24841983 processed_transcript
ENST00000611764 (POLA1-201) 24693947-24996983 protein_coding
ENSG00000232472 (EEF1B2P3)
eukaryotic translation elongation factor 1 beta 2 pseudogene 3 		ENST00000447718 (EEF1B2P3-001) 24788392-24789069 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001X9_0001ENSDARG00000045308ENSDART00000127188ENSDART00000128595ENSDART00000138097ENSDARG00000058011ENSDART00000080810CIL_0001X9_0002ENSG00000004848ENST00000379044ENSG00000101868ENST00000379059ENST00000379068ENST00000480125ENST00000493342ENST00000494204ENST00000611764ENSG00000232472ENST00000447718
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001X9_0001ENSDARG00000045308ENSDART00000127188ENSDART00000128595ENSDART00000138097ENSDARG00000058011ENSDART00000080810CIL_0001X9_0002ENSG00000004848ENST00000379044ENSG00000101868ENST00000379059ENST00000379068ENST00000494204ENST00000611764ENSG00000232472ENST00000447718
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045308 ENSDART00000127188 N/A N/A N/A 0.794±0.41 N/A N/A 0.773±0.00 1.872±0.00 0.232±0.00 N/A N/A N/A N/A N/A
ENSDART00000128595 N/A N/A N/A 0.870±0.25 N/A N/A 0.262±0.00 2.024±2.62 N/A N/A 0.345±0.00 N/A N/A N/A
ENSDART00000138097 N/A N/A N/A N/A N/A N/A 0.223±0.00 N/A 0.242±0.00 N/A N/A N/A N/A N/A
ENSDARG00000058011 ENSDART00000080810 N/A N/A N/A N/A N/A N/A 0.080±0.01 N/A 0.020±0.00 N/A 0.165±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000004848 ENST00000379044 0.018±0.00 0.092±0.00 N/A 2.037±0.74 0.394±0.00 0.072±0.05 N/A 0.087±0.00 N/A 0.496±0.46 2.377±1.68 23.275±25.60 0.217±0.01 8.552±4.98
ENSG00000101868 ENST00000379059 1.853±0.00 0.894±0.00 N/A 0.909±0.00 1.600±0.00 1.330±0.05 N/A 1.696±0.00 0.149±0.00 N/A N/A 0.906±0.00 0.534±0.18 3.328±0.00
ENST00000379068 N/A 0.692±0.00 0.447±0.00 0.159±0.00 N/A 1.002±0.25 0.811±0.63 N/A 0.786±0.00 1.386±0.21 1.284±0.00 2.760±1.26 1.884±0.22 1.603±0.00
ENST00000480125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494204 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.700±0.00 N/A N/A N/A
ENST00000611764 N/A N/A N/A 0.456±0.00 N/A N/A N/A 0.321±0.00 0.242±0.00 N/A 0.499±0.00 0.398±0.00 N/A N/A
ENSG00000232472 ENST00000447718 0.081±0.00 0.283±0.00 N/A 0.088±0.00 1.224±0.00 0.268±0.00 N/A 0.159±0.04 0.059±0.00 0.085±0.00 0.115±0.00 0.675±0.53 0.156±0.08 0.048±0.00

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