C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000286_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109066-ENSG00000161509 CGP 9606 17:74776483-74861504
GeneTranscriptPositionBiotype
ENSG00000109066 (TMEM104)
transmembrane protein 104 		ENST00000335464 (TMEM104-201) 74776483-74839779 protein_coding
ENST00000417024 (TMEM104-002) 74776499-74839752 protein_coding
ENST00000578764 (TMEM104-005) 74776500-74795589 protein_coding
ENST00000582330 (TMEM104-001) 74776520-74839753 protein_coding
ENST00000582773 (TMEM104-003) 74776500-74839751 protein_coding
ENST00000584171 (TMEM104-006) 74837099-74837908 processed_transcript
ENST00000584246 (TMEM104-004) 74776509-74785680 retained_intron
ENSG00000161509 (GRIN2C)
glutamate receptor, ionotropic, N-methyl D-aspartate 2C 		ENST00000293190 (GRIN2C-001) 74842023-74859875 protein_coding
ENST00000347612 (GRIN2C-002) 74844032-74860535 protein_coding
ENST00000578159 (GRIN2C-005) 74852074-74861504 processed_transcript
ENST00000584176 (GRIN2C-004) 74843364-74859872 retained_intron
ENST00000584496 (GRIN2C-003) 74853517-74860841 retained_intron
CIL_000286_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000045980-ENSMUSG00000020734 CGP 10090 11:115187487-115267243
GeneTranscriptPositionBiotype
ENSMUSG00000015542 (Nat9)
N-acetyltransferase 9 (GCN5-related, putative) 		ENSMUST00000103038 (Nat9-002) 115182832-115187332 protein_coding
ENSMUST00000103039 (Nat9-005) 115182832-115187355 protein_coding
ENSMUST00000103040 (Nat9-001) 115182832-115187390 protein_coding
ENSMUST00000103041 (Nat9-003) 115182832-115187844 protein_coding
ENSMUST00000127419 (Nat9-009) 115184795-115187859 processed_transcript
ENSMUST00000134399 (Nat9-004) 115184794-115187842 processed_transcript
ENSMUST00000134769 (Nat9-006) 115184978-115187276 processed_transcript
ENSMUST00000137843 (Nat9-008) 115184604-115187081 processed_transcript
ENSMUST00000153796 (Nat9-007) 115184500-115187262 processed_transcript
ENSMUSG00000020734 (Grin2c)
glutamate receptor, ionotropic, NMDA2C (epsilon 3) 		ENSMUST00000003351 (Grin2c-001) 115249169-115265429 protein_coding
ENSMUST00000106554 (Grin2c-201) 115249169-115267243 protein_coding
ENSMUSG00000045980 (Tmem104)
transmembrane protein 104 		ENSMUST00000061450 (Tmem104-004) 115187487-115247023 protein_coding
ENSMUST00000100235 (Tmem104-001) 115187487-115247023 protein_coding
ENSMUST00000135536 (Tmem104-003) 115187511-115197403 processed_transcript
ENSMUST00000156230 (Tmem104-002) 115187551-115245764 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000286_0001ENSG00000109066ENST00000335464ENST00000417024ENST00000578764ENST00000582330ENST00000582773ENST00000584171ENST00000584246ENSG00000161509ENST00000293190ENST00000347612ENST00000578159ENST00000584176ENST00000584496CIL_000286_0002ENSMUSG00000015542ENSMUST00000103038ENSMUST00000103039ENSMUST00000103040ENSMUST00000103041ENSMUST00000127419ENSMUST00000134399ENSMUST00000134769ENSMUST00000137843ENSMUST00000153796ENSMUSG00000020734ENSMUST00000003351ENSMUST00000106554ENSMUSG00000045980ENSMUST00000061450ENSMUST00000100235ENSMUST00000135536ENSMUST00000156230
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000286_0001ENSG00000109066ENST00000335464ENST00000417024ENST00000582330ENST00000582773ENST00000584171ENST00000584246ENSG00000161509ENST00000293190ENST00000347612ENST00000584176ENST00000584496CIL_000286_0002ENSMUSG00000015542ENSMUST00000103038ENSMUST00000103040ENSMUST00000103041ENSMUST00000134769ENSMUST00000137843ENSMUST00000153796ENSMUSG00000020734ENSMUST00000003351ENSMUST00000106554ENSMUSG00000045980ENSMUST00000061450ENSMUST00000100235ENSMUST00000156230
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109066 ENST00000335464 N/A N/A 0.173±0.00 N/A N/A 0.392±0.00 0.090±0.00 N/A 0.216±0.00 0.478±0.00 N/A 1.068±0.00 2.600±0.45 N/A
ENST00000417024 N/A 0.921±0.00 N/A N/A N/A N/A N/A N/A 0.076±0.00 N/A N/A N/A N/A N/A
ENST00000578764 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582330 1.208±0.00 0.948±0.00 N/A 1.559±0.00 4.447±0.00 0.873±0.00 1.071±0.00 4.392±0.00 3.070±0.00 0.670±0.00 N/A 4.020±2.97 3.803±1.17 5.470±0.76
ENST00000582773 N/A N/A 0.583±0.00 N/A 0.449±0.00 N/A 0.269±0.00 1.107±0.00 N/A N/A N/A 0.181±0.00 N/A N/A
ENST00000584171 N/A N/A N/A N/A 0.912±0.00 N/A N/A N/A N/A N/A N/A 1.080±0.00 N/A N/A
ENST00000584246 N/A N/A N/A N/A N/A 2.531±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000161509 ENST00000293190 N/A N/A N/A 3.320±0.00 0.036±0.00 N/A N/A N/A 0.021±0.00 N/A N/A 0.192±0.11 1.458±0.00 1.340±0.63
ENST00000347612 N/A N/A N/A N/A 0.085±0.00 0.254±0.00 0.217±0.00 N/A N/A N/A N/A 0.123±0.00 0.459±0.05 1.369±0.93
ENST00000578159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000584176 0.063±0.00 N/A 0.019±0.00 0.346±0.00 0.042±0.00 0.024±0.00 N/A N/A N/A N/A 0.130±0.00 0.034±0.02 N/A N/A
ENST00000584496 N/A N/A N/A N/A N/A N/A 0.124±0.00 N/A N/A N/A N/A 0.044±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015542 ENSMUST00000103038 4.171±1.13 1.929±0.13 3.951±0.00 2.757±1.89 1.859±0.26 3.879±0.62 1.850±0.32 3.719±0.80 2.525±0.83 3.780±1.29 1.392±0.83 6.006±4.70 6.478±4.23 20.815±0.00
ENSMUST00000103039 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000103040 6.525±1.48 4.247±2.11 5.973±0.09 3.101±0.93 2.309±0.29 7.104±1.04 4.017±1.50 9.207±2.13 7.102±3.16 7.399±1.38 4.113±1.62 4.804±0.81 6.637±1.82 18.368±6.42
ENSMUST00000103041 4.915±1.27 2.560±0.45 N/A 7.169±6.04 4.384±1.21 4.609±1.51 3.129±0.45 3.215±0.27 3.053±0.00 4.147±0.00 1.154±0.00 9.493±4.39 18.118±14.91 41.539±4.41
ENSMUST00000127419 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134769 N/A N/A N/A 21.188±0.00 N/A N/A N/A N/A N/A N/A N/A 17.750±4.34 20.995±10.55 60.198±0.00
ENSMUST00000137843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.191±0.38 N/A N/A
ENSMUST00000153796 3.074±0.00 N/A 4.328±0.00 N/A 6.450±0.00 N/A N/A N/A 4.350±0.80 N/A 1.760±0.00 6.306±0.60 N/A N/A
ENSMUSG00000020734 ENSMUST00000003351 0.019±0.01 2.878±0.55 0.124±0.06 0.342±0.00 0.103±0.07 0.019±0.01 0.444±0.05 0.113±0.04 0.056±0.03 0.602±0.04 0.022±0.01 1.828±0.45 0.120±0.08 N/A
ENSMUST00000106554 0.035±0.00 2.629±1.69 N/A 5.600±0.00 0.071±0.01 N/A 0.113±0.01 0.074±0.02 0.026±0.01 1.195±0.00 N/A 1.546±0.63 0.058±0.00 0.088±0.00
ENSMUSG00000045980 ENSMUST00000061450 4.692±0.72 7.345±0.65 2.706±0.47 1.788±0.04 2.911±1.12 3.818±0.81 1.436±0.29 2.893±0.33 1.471±0.55 3.464±0.53 1.021±0.41 4.148±1.16 5.223±3.13 0.654±0.47
ENSMUST00000100235 N/A N/A N/A N/A 1.060±0.17 N/A N/A 0.514±0.00 0.183±0.00 N/A N/A 1.543±0.04 2.351±0.00 0.257±0.22
ENSMUST00000135536 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156230 4.662±1.73 4.779±0.69 0.799±0.30 1.330±0.21 4.435±1.73 1.803±0.72 1.616±0.50 2.163±0.45 1.322±0.62 4.266±0.26 0.716±0.30 5.006±1.81 7.254±3.99 3.350±0.91

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