C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, N-methyl D-aspartate 2C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000584176 GRIN2C-004 ENSG00000161509 9606 - 17:74843364-74859872 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonMuscleOvaryENST00000584176
Transcript ID Adipose Bladder Brain Breast Colon Muscle Ovary
ENST00000584176 0.063±0.00 0.019±0.00 0.346±0.00 0.042±0.00 0.024±0.00 0.130±0.00 0.034±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000286 CIL_000286_0001 CGP 17:74776483-74861504
CIL_0001FN CIL_0001FN_0001 CGP 17:74842023-74873031

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106554 Grin2c-201 protein_coding Mus_musculus 0 1138
ENSMUST00000003351 Grin2c-001 protein_coding Mus_musculus 0 1138
ENSMUST00000002848 Grin2d-001 protein_coding Mus_musculus 0 538
ENSDART00000110554 grin2ca-201 protein_coding Danio_rerio 0 516
ENSDART00000145215 grin2ca-001 protein_coding Danio_rerio 0 516

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