C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_00029R_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000178919-ENSG00000136932 CGP 9606 9:97853254-97922570
GeneTranscriptPositionBiotype
ENSG00000178919 (FOXE1)
forkhead box E1 (thyroid transcription factor 2)
ENST00000375123 (FOXE1-001) 97853254-97856715 protein_coding
ENSG00000201830 (Y_RNA)
Y RNA
ENST00000364960 (Y_RNA.1-500) 97915690-97915796 misc_RNA
CIL_00029R_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000070990-ENSMUSG00000028331 CGP 10090 4:46343609-46389437
GeneTranscriptPositionBiotype
ENSMUSG00000028331 (5830415F09Rik)
RIKEN cDNA 5830415F09 gene
ENSMUST00000030015 (5830415F09Rik-001) 46379864-46389437 protein_coding
ENSMUST00000086563 (5830415F09Rik-003) 46376979-46389423 protein_coding
ENSMUST00000151903 (5830415F09Rik-002) 46376505-46389418 nonsense_mediated_decay
ENSMUSG00000070990 (Foxe1)
forkhead box E1
ENSMUST00000095097 (Foxe1-001) 46343609-46346412 protein_coding
ENSMUSG00000087383 (Gm12446)
predicted gene 12446
ENSMUST00000123933 (Gm12446-001) 46300007-46343431 antisense
ENSMUST00000152069 (Gm12446-002) 46328464-46345515 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029R_0001ENSG00000178919ENST00000375123ENSG00000201830ENST00000364960CIL_00029R_0002ENSMUSG00000028331ENSMUST00000030015ENSMUST00000086563ENSMUST00000151903ENSMUSG00000070990ENSMUST00000095097ENSMUSG00000087383ENSMUST00000123933ENSMUST00000152069
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00029R_0001ENSG00000178919ENST00000375123ENSG00000201830ENST00000364960CIL_00029R_0002ENSMUSG00000028331ENSMUST00000030015ENSMUST00000086563ENSMUST00000151903ENSMUSG00000070990ENSMUST00000095097ENSMUSG00000087383ENSMUST00000123933ENSMUST00000152069
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000178919 ENST00000375123 0.014±0.00 N/A N/A 0.016±0.00 0.036±0.00 0.019±0.00 N/A 0.030±0.00 0.147±0.00 0.156±0.00 0.158±0.09 0.613±0.76 N/A 0.300±0.11
ENSG00000201830 ENST00000364960 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.746±0.00 N/A 1.416±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028331 ENSMUST00000030015 2.973±1.08 2.145±0.52 2.366±0.39 3.162±0.32 3.157±0.55 2.092±0.89 1.873±0.08 2.893±0.66 6.094±4.94 2.546±0.28 0.938±0.27 5.345±2.06 4.080±1.14 5.869±0.54
ENSMUST00000086563 N/A N/A N/A N/A N/A 0.594±0.14 N/A 0.353±0.00 N/A 0.614±0.00 N/A 1.492±0.00 N/A N/A
ENSMUST00000151903 0.164±0.00 0.391±0.00 N/A 0.324±0.01 N/A 0.274±0.00 N/A N/A 2.086±1.21 0.361±0.00 0.069±0.00 0.470±0.00 N/A N/A
ENSMUSG00000070990 ENSMUST00000095097 N/A 0.097±0.03 0.004±0.00 0.011±0.00 0.017±0.00 0.027±0.01 N/A N/A 0.022±0.01 0.199±0.27 N/A 0.050±0.02 0.017±0.01 0.019±0.01
ENSMUSG00000087383 ENSMUST00000123933 N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000152069 N/A N/A N/A 0.340±0.00 N/A 0.086±0.00 N/A N/A 0.018±0.00 N/A N/A 0.087±0.00 0.067±0.02 0.140±0.00

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