C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002CF_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000036913-ENSDARG00000043897 CGP 7955 21:4072102-4099982
GeneTranscriptPositionBiotype
ENSDARG00000036913 (st6galnac6)
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 		ENSDART00000053607 (st6galnac6-201) 4072102-4076458 protein_coding
ENSDART00000133792 (st6galnac6-001) 4072102-4076458 protein_coding
ENSDARG00000043897 (st6galnac4)
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 		ENSDART00000064461 (st6galnac4-201) 4092270-4099982 protein_coding
ENSDART00000151598 (st6galnac4-001) 4092268-4095635 protein_coding
CIL_0002CF_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000160408-ENSG00000136840 CGP 9606 9:127885321-127917038
GeneTranscriptPositionBiotype
ENSG00000136840 (ST6GALNAC4)
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 		ENST00000335791 (ST6GALNAC4-001) 127907886-127917026 protein_coding
ENST00000361444 (ST6GALNAC4-004) 127908447-127916996 protein_coding
ENST00000467674 (ST6GALNAC4-003) 127908344-127917018 processed_transcript
ENST00000474282 (ST6GALNAC4-006) 127908325-127912394 processed_transcript
ENST00000479747 (ST6GALNAC4-002) 127915976-127917038 processed_transcript
ENST00000483438 (ST6GALNAC4-007) 127912387-127914866 processed_transcript
ENST00000495983 (ST6GALNAC4-005) 127908318-127914762 processed_transcript
ENSG00000160408 (ST6GALNAC6)
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 		ENST00000291839 (ST6GALNAC6-201) 127885321-127897981 protein_coding
ENST00000373141 (ST6GALNAC6-010) 127885322-127897408 protein_coding
ENST00000373142 (ST6GALNAC6-006) 127885322-127899646 protein_coding
ENST00000373144 (ST6GALNAC6-008) 127885322-127899655 protein_coding
ENST00000373146 (ST6GALNAC6-007) 127885321-127899653 protein_coding
ENST00000447681 (ST6GALNAC6-011) 127890637-127905330 protein_coding
ENST00000463086 (ST6GALNAC6-014) 127886754-127899593 processed_transcript
ENST00000478319 (ST6GALNAC6-004) 127894549-127899535 processed_transcript
ENST00000480417 (ST6GALNAC6-012) 127887535-127899606 processed_transcript
ENST00000481355 (ST6GALNAC6-001) 127894522-127899416 processed_transcript
ENST00000483353 (ST6GALNAC6-015) 127903015-127905324 retained_intron
ENST00000485320 (ST6GALNAC6-009) 127885326-127899574 processed_transcript
ENST00000494541 (ST6GALNAC6-013) 127890698-127899604 processed_transcript
ENST00000494611 (ST6GALNAC6-005) 127896246-127905408 processed_transcript
ENST00000542456 (ST6GALNAC6-202) 127885321-127897408 protein_coding
ENST00000622357 (ST6GALNAC6-203) 127885321-127905348 protein_coding
ENSG00000257524 (RP11-203J24.9)
 ENST00000476274 (RP11-203J24.9-003) 127867864-127886787 processed_transcript
ENST00000548587 (RP11-203J24.9-001) 127872712-127885432 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CF_0001ENSDARG00000036913ENSDART00000053607ENSDART00000133792ENSDARG00000043897ENSDART00000064461ENSDART00000151598CIL_0002CF_0002ENSG00000136840ENST00000335791ENST00000361444ENST00000467674ENST00000474282ENST00000479747ENST00000483438ENST00000495983ENSG00000160408ENST00000291839ENST00000373141ENST00000373142ENST00000373144ENST00000373146ENST00000447681ENST00000463086ENST00000478319ENST00000480417ENST00000481355ENST00000483353ENST00000485320ENST00000494541ENST00000494611ENST00000542456ENST00000622357ENSG00000257524ENST00000476274ENST00000548587
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002CF_0001ENSDARG00000036913ENSDART00000053607ENSDARG00000043897ENSDART00000064461ENSDART00000151598CIL_0002CF_0002ENSG00000136840ENST00000335791ENST00000361444ENST00000474282ENST00000479747ENST00000483438ENST00000495983ENSG00000160408ENST00000291839ENST00000373141ENST00000373142ENST00000373144ENST00000373146ENST00000480417ENST00000485320ENST00000622357ENSG00000257524ENST00000476274ENST00000548587
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000036913 ENSDART00000053607 N/A N/A N/A 6.429±6.21 N/A N/A N/A 0.098±0.00 0.041±0.00 N/A 0.262±0.00 N/A N/A N/A
ENSDART00000133792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000043897 ENSDART00000064461 N/A N/A N/A 0.792±0.00 N/A N/A 0.459±0.00 0.174±0.00 N/A N/A 0.425±0.00 N/A N/A N/A
ENSDART00000151598 N/A N/A N/A 0.543±0.22 N/A N/A 0.324±0.08 N/A 0.214±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000136840 ENST00000335791 10.553±0.00 12.445±0.00 N/A 2.462±0.00 3.417±1.35 5.463±4.24 3.269±2.74 4.504±4.25 2.244±0.00 8.535±7.66 5.169±0.00 17.526±14.83 8.043±3.93 4.178±2.97
ENST00000361444 13.033±0.00 6.403±0.00 N/A 2.163±0.61 3.921±2.23 6.776±3.51 1.704±0.00 2.545±1.85 1.512±0.00 4.689±0.00 3.628±0.01 18.992±12.99 6.014±1.81 5.358±0.56
ENST00000467674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000474282 N/A N/A 0.403±0.00 N/A N/A N/A 0.660±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000479747 N/A N/A N/A N/A N/A N/A 0.478±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000483438 N/A N/A 2.447±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495983 N/A 3.329±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.911±0.00 N/A N/A
ENSG00000160408 ENST00000291839 N/A 25.828±0.00 N/A 25.892±0.00 N/A 19.153±0.00 N/A 18.065±15.07 N/A N/A N/A 33.770±18.43 14.593±5.15 11.033±0.00
ENST00000373141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.945±0.00 N/A N/A
ENST00000373142 N/A N/A 0.953±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000373144 77.192±0.00 33.807±0.00 N/A 19.784±14.71 52.942±50.51 44.154±0.00 15.800±0.00 18.499±0.00 12.071±10.72 72.300±0.00 N/A 31.856±22.27 15.480±0.00 28.289±0.00
ENST00000373146 N/A N/A N/A 4.124±0.00 1.430±0.00 N/A N/A N/A 0.914±0.00 2.948±0.00 N/A N/A N/A N/A
ENST00000447681 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463086 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478319 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480417 N/A N/A N/A N/A N/A N/A N/A N/A 2.175±0.00 N/A N/A N/A N/A N/A
ENST00000481355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000483353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485320 N/A N/A N/A 3.354±0.00 N/A 11.579±9.50 N/A N/A 15.667±0.00 42.011±0.00 N/A 0.801±0.00 7.418±2.86 N/A
ENST00000494541 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494611 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000542456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622357 N/A N/A N/A N/A N/A 3.523±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257524 ENST00000476274 N/A N/A 0.928±0.00 N/A 2.432±0.00 3.454±0.00 11.559±0.00 N/A 1.593±0.00 6.579±0.00 30.651±0.00 1.567±0.00 N/A N/A
ENST00000548587 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.362±0.00 N/A N/A

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