C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002DR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000113742-ENSG00000185056 CGP 9606 5:173888280-174006140
GeneTranscriptPositionBiotype
ENSG00000113742 (CPEB4)
cytoplasmic polyadenylation element binding protein 4 		ENST00000265085 (CPEB4-001) 173888280-173961976 protein_coding
ENST00000334035 (CPEB4-002) 173889340-173960309 protein_coding
ENST00000517880 (CPEB4-006) 173893078-173956457 protein_coding
ENST00000518141 (CPEB4-009) 173890666-173891607 processed_transcript
ENST00000519152 (CPEB4-008) 173890677-173945092 protein_coding
ENST00000519467 (CPEB4-010) 173918216-173956514 processed_transcript
ENST00000519835 (CPEB4-004) 173889531-173953439 protein_coding
ENST00000520867 (CPEB4-003) 173889340-173956235 protein_coding
ENST00000522336 (CPEB4-005) 173893051-173956514 protein_coding
ENST00000522344 (CPEB4-007) 173890674-173910818 retained_intron
ENSG00000185056 (C5orf47)
chromosome 5 open reading frame 47 		ENST00000340147 (C5orf47-001) 173989159-174006140 protein_coding
ENST00000522195 (C5orf47-002) 173973779-174005196 processed_transcript
CIL_0002DR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000020300-ENSMUSG00000020299 CGP 10090 11:31872211-31979651
GeneTranscriptPositionBiotype
ENSMUSG00000020299 (4930524B15Rik)
RIKEN cDNA 4930524B15 gene 		ENSMUST00000102829 (4930524B15Rik-001) 31965592-31979651 protein_coding
ENSMUSG00000020300 (Cpeb4)
cytoplasmic polyadenylation element binding protein 4 		ENSMUST00000020543 (Cpeb4-201) 31872211-31931577 protein_coding
ENSMUST00000109412 (Cpeb4-001) 31872226-31935634 protein_coding
ENSMUST00000155278 (Cpeb4-002) 31873275-31935634 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DR_0001ENSG00000113742ENST00000265085ENST00000334035ENST00000517880ENST00000518141ENST00000519152ENST00000519467ENST00000519835ENST00000520867ENST00000522336ENST00000522344ENSG00000185056ENST00000340147ENST00000522195CIL_0002DR_0002ENSMUSG00000020299ENSMUST00000102829ENSMUSG00000020300ENSMUST00000020543ENSMUST00000109412ENSMUST00000155278
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002DR_0001ENSG00000113742ENST00000265085ENST00000334035ENST00000520867ENSG00000185056ENST00000340147ENST00000522195CIL_0002DR_0002ENSMUSG00000020299ENSMUST00000102829ENSMUSG00000020300ENSMUST00000020543ENSMUST00000109412ENSMUST00000155278
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000113742 ENST00000265085 N/A N/A N/A N/A N/A N/A 4.266±0.00 N/A N/A N/A N/A 0.328±0.01 0.280±0.00 N/A
ENST00000334035 N/A N/A 14.066±0.00 11.815±0.00 2.969±2.27 2.236±1.76 6.362±1.46 3.576±1.32 4.706±3.16 4.247±3.06 7.294±4.78 2.667±1.25 2.498±0.31 2.786±0.00
ENST00000517880 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000518141 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519152 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519467 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519835 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520867 N/A N/A N/A N/A N/A N/A 11.375±5.61 N/A N/A N/A 8.242±0.00 N/A N/A N/A
ENST00000522336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000185056 ENST00000340147 N/A 0.020±0.00 N/A 0.083±0.03 0.012±0.00 N/A 0.079±0.00 N/A N/A N/A N/A 0.028±0.00 0.015±0.00 6.366±0.84
ENST00000522195 N/A N/A N/A 0.132±0.00 N/A N/A 0.057±0.00 N/A N/A N/A N/A 0.022±0.00 0.024±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000020299 ENSMUST00000102829 0.018±0.00 0.132±0.11 0.014±0.01 0.020±0.01 0.029±0.01 N/A N/A 0.022±0.00 0.020±0.01 0.086±0.01 N/A 0.039±0.02 0.022±0.01 12.520±5.55
ENSMUSG00000020300 ENSMUST00000020543 2.640±0.85 2.951±1.23 N/A N/A 1.649±0.38 3.146±1.23 2.249±0.00 4.620±1.91 3.049±0.00 3.756±1.87 N/A 1.760±0.88 N/A 9.408±3.44
ENSMUST00000109412 3.603±1.74 5.634±1.34 1.793±0.13 5.356±3.53 3.579±0.62 4.365±1.81 4.515±0.87 8.116±3.22 8.080±5.75 5.985±0.84 N/A 2.116±0.61 2.789±0.03 0.997±0.00
ENSMUST00000155278 1.502±0.34 N/A 4.228±0.69 2.960±0.51 1.265±0.00 1.231±0.16 1.803±0.30 2.961±0.49 6.481±4.08 3.502±0.11 7.341±1.94 1.314±0.76 3.156±2.58 5.650±0.36

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