Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	cytoplasmic polyadenylation element binding protein 4
ENSMUST00000155278	Cpeb4-002	ENSMUSG00000020300	10090	+	11:31873275-31935634	protein_coding

Expression Patterns

Transcript ID	Adipose	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENSMUST00000155278	1.502±0.34	4.228±0.69	2.960±0.51	1.265±0.00	1.231±0.16	1.803±0.30	2.961±0.49	6.481±4.08	3.502±0.11	7.341±1.94	1.314±0.76	3.156±2.58	5.650±0.36

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0002DQ	CIL_0002DQ_0002	CGP	11:31665181-31935634
CIL_0002DR	CIL_0002DR_0002	CGP	11:31872211-31979651

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000166	IEA	nucleotide binding
GO:0003723	IDA	RNA binding
GO:0045202	IDA	synapse

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSDART00000127580	CPEB4-201	protein_coding	Danio_rerio	0	370
ENST00000265085	CPEB4-001	protein_coding	Homo_sapiens	0	6615
ENST00000265997	CPEB3-002	protein_coding	Homo_sapiens	0	577
ENST00000334035	CPEB4-002	protein_coding	Homo_sapiens	0	6316
ENST00000412050	CPEB3-001	protein_coding	Homo_sapiens	0	582
ENST00000517880	CPEB4-006	protein_coding	Homo_sapiens	0	1613
ENST00000518141	CPEB4-009	processed_transcript	Homo_sapiens	0	219
ENST00000519152	CPEB4-008	protein_coding	Homo_sapiens	0	612
ENST00000519467	CPEB4-010	processed_transcript	Homo_sapiens	0	1615
ENST00000519835	CPEB4-004	protein_coding	Homo_sapiens	0	996
ENST00000520867	CPEB4-003	protein_coding	Homo_sapiens	0	1447
ENST00000522336	CPEB4-005	protein_coding	Homo_sapiens	0	1820
ENST00000522344	CPEB4-007	retained_intron	Homo_sapiens	0	344
ENST00000614585	CPEB3-201	protein_coding	Homo_sapiens	0	577

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