C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002JW_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000097920-ENSDARG00000019834 CGP 7955 17:8594167-8637550
GeneTranscriptPositionBiotype
ENSDARG00000019834 (EDRF1)
erythroid differentiation regulatory factor 1 		ENSDART00000105322 (EDRF1-001) 8599498-8637550 protein_coding
ENSDART00000155532 (EDRF1-002) 8607714-8611671 processed_transcript
ENSDARG00000097624 (si:rp71-40n14.5)
si:rp71-40n14.5 		ENSDART00000157193 (si:rp71-40n14.5-001) 8606271-8645052 antisense
ENSDARG00000097920 (TEX36)
testis expressed 36 		ENSDART00000154593 (TEX36-001) 8594167-8598832 protein_coding
CIL_0002JW_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000175018-ENSG00000107938 CGP 9606 10:125576522-125764143
GeneTranscriptPositionBiotype
ENSG00000107938 (EDRF1)
erythroid differentiation regulatory factor 1 		ENST00000337623 (EDRF1-001) 125719703-125764139 protein_coding
ENST00000356792 (EDRF1-007) 125719576-125763651 protein_coding
ENST00000368812 (EDRF1-004) 125749297-125764143 retained_intron
ENST00000368813 (EDRF1-002) 125735887-125741665 protein_coding
ENST00000368815 (EDRF1-008) 125719576-125763651 nonsense_mediated_decay
ENST00000419769 (EDRF1-006) 125719515-125763579 nonsense_mediated_decay
ENST00000469725 (EDRF1-005) 125746701-125749441 retained_intron
ENST00000481600 (EDRF1-003) 125719515-125764143 nonsense_mediated_decay
ENST00000525091 (EDRF1-009) 125719702-125749096 retained_intron
ENST00000525358 (EDRF1-013) 125753779-125763582 nonsense_mediated_decay
ENST00000525524 (EDRF1-011) 125747953-125749813 retained_intron
ENST00000527655 (EDRF1-012) 125749273-125763706 retained_intron
ENST00000530795 (EDRF1-010) 125725766-125735749 nonsense_mediated_decay
ENSG00000175018 (TEX36)
testis expressed 36 		ENST00000368821 (TEX36-001) 125655694-125683144 protein_coding
ENST00000526819 (TEX36-002) 125621613-125683130 protein_coding
ENST00000532135 (TEX36-003) 125576522-125683106 protein_coding
ENSG00000214297 (ALDOAP2)
aldolase A, fructose-bisphosphate pseudogene 2 		ENST00000398050 (ALDOAP2-001) 125666875-125667950 processed_pseudogene
ENSG00000234134 (RP11-383C5.5)
 ENST00000430970 (RP11-383C5.5-001) 125718771-125719365 sense_intronic
CIL_0002JW_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030976-ENSMUSG00000039990 CGP 10090 7:133587024-133672971
GeneTranscriptPositionBiotype
ENSMUSG00000030976 (Tex36)
testis expressed 36 		ENSMUST00000033275 (Tex36-201) 133587024-133602115 protein_coding
ENSMUSG00000039990 (Edrf1)
erythroid differentiation regulatory factor 1 		ENSMUST00000051169 (Edrf1-001) 133637543-133672971 protein_coding
ENSMUST00000128901 (Edrf1-003) 133637693-133672179 protein_coding
ENSMUST00000137338 (Edrf1-005) 133667206-133671470 retained_intron
ENSMUST00000138370 (Edrf1-002) 133657105-133661881 nonsense_mediated_decay
ENSMUST00000154795 (Edrf1-004) 133637861-133639349 retained_intron
ENSMUST00000176661 (Edrf1-006) 133665926-133671929 protein_coding
ENSMUSG00000101546 (RP23-57D10.1)
predicted gene 28747 		ENSMUST00000185366 (RP23-57D10.1-001) 133626349-133627725 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JW_0001ENSDARG00000019834ENSDART00000105322ENSDART00000155532ENSDARG00000097624ENSDART00000157193ENSDARG00000097920ENSDART00000154593CIL_0002JW_0002ENSG00000107938ENST00000337623ENST00000356792ENST00000368812ENST00000368813ENST00000368815ENST00000419769ENST00000469725ENST00000481600ENST00000525091ENST00000525358ENST00000525524ENST00000527655ENST00000530795ENSG00000175018ENST00000368821ENST00000526819ENST00000532135ENSG00000214297ENST00000398050ENSG00000234134ENST00000430970CIL_0002JW_0003ENSMUSG00000030976ENSMUST00000033275ENSMUSG00000039990ENSMUST00000051169ENSMUST00000128901ENSMUST00000137338ENSMUST00000138370ENSMUST00000154795ENSMUST00000176661ENSMUSG00000101546ENSMUST00000185366
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002JW_0001ENSDARG00000019834ENSDART00000105322ENSDARG00000097624ENSDART00000157193ENSDARG00000097920ENSDART00000154593CIL_0002JW_0002ENSG00000107938ENST00000337623ENST00000356792ENST00000368812ENST00000368813ENST00000419769ENST00000481600ENST00000525091ENSG00000175018ENST00000368821ENST00000526819ENST00000532135ENSG00000214297ENST00000398050ENSG00000234134ENST00000430970CIL_0002JW_0003ENSMUSG00000030976ENSMUST00000033275ENSMUSG00000039990ENSMUST00000051169ENSMUST00000128901ENSMUST00000176661ENSMUSG00000101546ENSMUST00000185366
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000019834 ENSDART00000105322 N/A N/A N/A 2.552±0.89 N/A N/A 2.377±0.43 3.102±0.58 0.710±0.00 N/A 0.964±0.00 N/A N/A N/A
ENSDART00000155532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000097624 ENSDART00000157193 N/A N/A N/A N/A N/A N/A 2.734±0.00 N/A N/A N/A 0.796±0.00 N/A N/A N/A
ENSDARG00000097920 ENSDART00000154593 N/A N/A N/A 0.260±0.15 N/A N/A 0.183±0.10 1.270±0.47 N/A N/A 0.088±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107938 ENST00000337623 0.810±0.00 1.250±0.00 N/A 1.094±0.46 1.271±0.14 1.452±0.25 0.869±0.56 1.575±0.00 0.349±0.00 0.734±0.49 2.612±0.00 1.596±0.69 0.691±0.15 6.254±0.45
ENST00000356792 0.449±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.737±0.34 N/A 3.070±0.00 0.371±0.14 N/A
ENST00000368812 N/A 2.410±0.00 N/A 2.448±0.00 2.179±0.00 1.339±0.00 0.686±0.00 2.138±1.19 0.780±0.00 0.716±0.00 N/A 4.365±1.45 0.875±0.23 10.736±0.00
ENST00000368813 N/A 2.778±0.00 N/A N/A N/A N/A N/A N/A 3.308±0.00 N/A 1.509±0.00 N/A N/A N/A
ENST00000368815 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419769 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.315±0.00 3.469±0.00
ENST00000469725 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000481600 N/A N/A N/A N/A N/A N/A N/A N/A 1.551±0.00 N/A N/A N/A N/A N/A
ENST00000525091 N/A 0.669±0.00 0.674±0.00 0.621±0.00 0.878±0.16 N/A N/A N/A N/A 0.661±0.34 0.601±0.00 0.771±0.19 0.250±0.00 N/A
ENST00000525358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525524 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527655 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000530795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000175018 ENST00000368821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.036±0.00 3.460±0.37
ENST00000526819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 20.289±14.90
ENST00000532135 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.932±2.52
ENSG00000214297 ENST00000398050 0.114±0.00 0.165±0.00 N/A 0.287±0.00 0.182±0.00 0.409±0.00 0.210±0.00 0.239±0.00 0.019±0.00 0.149±0.00 1.304±0.00 N/A N/A 0.097±0.06
ENSG00000234134 ENST00000430970 N/A 0.259±0.00 N/A 0.422±0.00 N/A N/A N/A N/A N/A N/A N/A 0.202±0.00 N/A 0.339±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030976 ENSMUST00000033275 0.198±0.00 N/A N/A 0.041±0.01 0.091±0.00 N/A N/A 0.077±0.03 N/A N/A N/A 0.029±0.00 0.050±0.03 41.071±16.90
ENSMUSG00000039990 ENSMUST00000051169 1.006±0.31 0.730±0.01 1.617±0.22 2.211±0.18 1.137±0.05 0.998±0.04 0.402±0.10 1.174±0.21 1.121±0.59 0.970±0.00 0.378±0.12 1.205±0.64 1.798±0.26 1.751±0.81
ENSMUST00000128901 1.434±0.60 1.671±0.64 3.316±0.79 4.268±0.59 1.854±0.53 1.376±0.19 1.212±0.18 1.592±0.42 2.338±0.97 1.935±0.28 1.473±0.22 2.757±1.30 4.401±1.06 2.800±1.07
ENSMUST00000137338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138370 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000176661 N/A 2.345±0.00 N/A N/A N/A 2.311±0.17 N/A N/A N/A N/A N/A 3.655±0.00 N/A N/A
ENSMUSG00000101546 ENSMUST00000185366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.119±0.07

Loading