C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 65
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000508873 HNRNPA1P65-001 ENSG00000248444 9606 + 4:24771467-24772420 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLungOvaryENST00000508873
Transcript ID Adrenal Brain Breast Colon Kidney Lung Ovary
ENST00000508873 0.043±0.00 0.073±0.00 0.029±0.00 0.013±0.00 0.014±0.00 0.014±0.00 0.076±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002OT CIL_0002OT_0001 CGP 4:24517441-24800842

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 966
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 966
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 933
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 876
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 872
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 861
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 774
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 774
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 747
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 641
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 377

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